CX296737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LEPIC (Elongation factor Tu OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 73/206 (35.44%), Postives = 105/206 (50.97%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D E+ RGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV +I NK D + + +V L K + + P V + EGD + + L++ALD + PKR DKP +P++DV+ I G GTV GRVE GVLK Sbjct: 52 IDNAPEEKARGITIATSHQEYETANRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGPMP-------QTKEHILLARQVGVPYVIVFINKADMLAADERAEMIEMVEMDVRELLNKYSFPGDTTPIVHGSAVKALEGD-----ESEIGMPAILKLMEALDTFVPNPKRVIDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LACH4 (Elongation factor Tu OS=Lactobacillus helveticus (strain DPC 4571) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D E+ERGITI+ A ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P V + EGD + L+D +D I P+R +DKP +P++DV+ I G GTV GR++ G +K G Sbjct: 51 IDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCDLVD---DPELIDLVEMEVRDLLTEYDYPGDDIPVVRGSALKALEGDKEAQEQI-------LKLMDTVDEYIPTPERQTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVG 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LACCB (Elongation factor Tu OS=Lactobacillus casei (strain BL23) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 75/211 (35.55%), Postives = 111/211 (52.61%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + + EGD E+ +++ +D I+E P R +DKP +P++DV+ I G GTV GR++ G +K G Sbjct: 51 IDAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGDPEQEK----------VIMELMDTIDEYIPTPVRETDKPFLMPVEDVFTITGRGTVASGRIDRGTVKIG 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LACC3 (Elongation factor Tu OS=Lactobacillus casei (strain ATCC 334) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 75/211 (35.55%), Postives = 111/211 (52.61%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + + EGD E+ +++ +D I+E P R +DKP +P++DV+ I G GTV GR++ G +K G Sbjct: 51 IDAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGDPEQEK----------VIMELMDTIDEYIPTPVRETDKPFLMPVEDVFTITGRGTVASGRIDRGTVKIG 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_KINRD (Elongation factor Tu OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 77/206 (37.38%), Postives = 111/206 (53.88%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH +LA +GV ++ NK D + + + EV L + + VP V +S EGD +W K L+DA+D I EP+R D+P +P++DV+ I G GTV GR+E GVL Sbjct: 52 IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVILARQVGVPYIVVALNKADMVE---DEELLELVEMEVRELLSSYEFPGDDVPVVRVSALKALEGD--------AEWGDKLMELMDAVDTAIPEPERAIDQPFLMPIEDVFTITGRGTVVTGRIERGVL 239
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_COREF (Elongation factor Tu OS=Corynebacterium efficiens GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 79/209 (37.80%), Postives = 111/209 (53.11%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +DK E+ERGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + Y+ E P V IS EGD ++E D DNI +P R +DKP +P++D++ I G GTV GRVE G L Sbjct: 52 IDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEEIIELVEMEVRELLAEQDYD-EDAPIVHISALKALEGDEKWAGQILELMQACD-----------DNIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGTL 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPN (Elongation factor Tu OS=Chlamydia pneumoniae GN=tuf PE=3 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 73/206 (35.44%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D E+ RGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD N IE+ L + DNI P+R DKP +P++DV+ I G GTV GR+E G++K Sbjct: 50 IDNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKVDMISQEDAEL-IDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDANYIEKVREL-------MQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGIVK 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_BAUCH (Elongation factor Tu OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 78/207 (37.68%), Postives = 111/207 (53.62%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D E+ RGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +I NK D + E+V+ EV L + + E P + G + ++DW K L + LD+ I EPKR DKP LP++DV+ I G GTV GRVE G+LK G Sbjct: 50 IDNAPEEKARGITINTSHVEYDTKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPYIIVFINKCDMV----DDSELLELVEIEVRELLSQYEFPGENTPII-----RGSALKALEHDVDWTSKIIELAEVLDSYIPEPKRAIDKPFLLPIEDVFSISGRGTVVTGRVERGILKVG 240
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU2_STRRA (Elongation factor Tu-2 OS=Streptomyces ramocissimus GN=tuf2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 77/205 (37.56%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + VP V +S EGD RS LLDA+D + EP R D+P +P++DV+ I G GTV GR+E G L Sbjct: 52 IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKTDMVD---DEEILELVELEVRELLTEYEFPGDDVPVVKVSALRALEGDPRWTRSV-------LELLDAVDEFVPEPVRDVDRPFLMPIEDVFTITGRGTVVTGRIERGTL 239
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_ZYMMO (Elongation factor Tu OS=Zymomonas mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.822e-26 Identity = 75/206 (36.41%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D P+ + EI + +SSY + + +P V S + +++ + +L+ A+D I +P+RP DK +P++DV+ I G GTV GRVETG++K G Sbjct: 51 IDKAPEERERGITISTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFMNKVDQVDDPELLELVEMEIRELLSSY----DFPGDDIPIVKGSALAA--LEDKNPEIGKEAILSLMAAVDEYIPQPERPLDKSFLMPIEDVFSISGRGTVVTGRVETGIVKVG 243 The following BLAST results are available for this feature:
BLAST of CX296737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296737 ID=CX296737; Name=CX296737; organism=Citrus clementina; type=EST; length=661bpback to top |