CX296737

Overview
NameCX296737
Unique NameCX296737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig789 contig Ccv1_Contig789:376..1036. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.421e-94
Identity = 172/231 (74.46%), Postives = 192/231 (83.12%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD  T  +++ARY EI+KE S+++KKVG+NP+ V FVPISGF GDNM+  STN  WYK            G TLL+A+D+I  PKRP+DKPLRLPLQDVYKIGGIGTVPVGR+ETGVLKPGMVVTF PS +T
Sbjct:   57 YAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMD--TANWAEARYQEIIKETSNFIKKVGFNPKAVAFVPISGFNGDNMLTPSTNCPWYKGWEKETKAGKFTGKTLLEAIDSIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPSNVT 285          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 2.421e-94
Identity = 170/231 (73.59%), Postives = 193/231 (83.55%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDI+LWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+    G FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P +S+ R++EI KEVS+Y+KK+GYNP  VPFVPISG+ GDNM+E STN+ W+K            G TLL+ALD I  P+RP++KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM+VTF PS +T
Sbjct:   56 YAWVLDKLKAERERGITIDISLWKFETGKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAGISKNGQTREHALLAFTLGVKQLIIGVNKMDSTEPPFSQKRFEEITKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEASTNMPWFKGWKIERKEGNASGITLLEALDCIIPPQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVT 286          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 2.421e-94
Identity = 172/231 (74.46%), Postives = 191/231 (82.68%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD++ P YS+ARY+EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E STN+ W+K            G TL+DALD I  P RP+DK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG VV F P+ +T
Sbjct:   56 YAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGTVVVFAPANIT 286          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.421e-94
Identity = 170/231 (73.59%), Postives = 193/231 (83.55%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P YS+ RY+EIVKEVS+Y+KK+GYNP+ V FVPISG+ GDNM+E S N+ W+K            G TLL+ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +T
Sbjct:   56 YAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSPNMPWFKGWKITRKEGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVT 286          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 3.162e-94
Identity = 172/231 (74.46%), Postives = 191/231 (82.68%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  ++S+ R++EI+KE  +++KKVGYNP  V FVPISGF GDNM+E STN  WYK            G TLL+A+D I  PKRP+DKPLRLPLQDVYKIGGIGTVPVGR+ETGVLKPGMVVTF PS +T
Sbjct:   57 YAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--QWSQTRFEEIIKETKNFIKKVGYNPAGVAFVPISGFNGDNMLEPSTNCPWYKGWEKETKAGKATGKTLLEAIDAIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPSNVT 285          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.162e-94
Identity = 164/219 (74.89%), Postives = 191/219 (87.21%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLD L AERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD A+LI+ + TG FEAGISK+GQTREH LL++TLGVKQMI   NKMDA   +Y + RY+EI KE+S++LKK GYNP+K+PFVPISGF+GDNMIE STN+ WYKGPTL+ ALD++  P+RP DKPLRLPLQDVYKI GIGTVPVGRVETG+LKPG +V F PSG++
Sbjct:   56 YAWVLDNLKAERERGITIDISLWKFETSKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVAAGTGEFEAGISKNGQTREHILLSYTLGVKQMIVGVNKMDAI--QYKQERYEEIKKEISAFLKKTGYNPDKIPFVPISGFQGDNMIEPSTNMPWYKGPTLIGALDSVTPPERPVDKPLRLPLQDVYKISGIGTVPVGRVETGILKPGTIVQFAPSGVS 272          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.162e-94
Identity = 170/231 (73.59%), Postives = 195/231 (84.42%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDIALWKFET KY+ TVIDAPGHRDFIKNMITGTSQADC +LII + TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD+T  K+S+ R++EI+KEVS ++KK+G+NP+ VPFVPISG+ GDNM+E STN+ WYK            G TLLDA+D I+ P+RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GMVVTF P+ +T
Sbjct:   56 YAWVLDKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCGILIIAAGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDST--KWSEQRFNEIIKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLEESTNMPWYKGWNKETKAGAKSGKTLLDAIDAIDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVT 284          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A1_OSCTI (Elongation factor 1-alpha 1 OS=Oscheius tipulae GN=eft-1 PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.162e-94
Identity = 167/231 (72.29%), Postives = 190/231 (82.25%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL AERERGITIDIALWKFET K+Y T+IDAPGHRDFIK MITGTSQADCAVL++   TG FEAGISK+GQTREHALLA TLGVKQMI  CNKMD+T P +S+ R++EI+ EV S++KK+GYNP  +PFVPISGF GDNM+E S N+ WYK            G TLL+ALD I  P+RP+D+PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +T
Sbjct:   56 YAWVLDKLKAERERGITIDIALWKFETAKFYVTIIDAPGHRDFIKKMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQMIVACNKMDSTEPPFSEKRFEEIITEVKSFIKKIGYNPATIPFVPISGFNGDNMLEPSANMSWYKGWSVERKEGNASGKTLLEALDCIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNVT 286          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A_AURPU (Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 9.200e-94
Identity = 172/230 (74.78%), Postives = 191/230 (83.04%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK-----------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 659
            YAWVLDKL +ERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  K+S+ARY EI+KE S ++KKVGYNP+ VPFVPISGF GDNMIE S+N  WYK           G TLL+A+D I+ P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +K GMVVTF P+G+T
Sbjct:   56 YAWVLDKLKSERERGITIDIALWKFETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--KWSEARYQEIIKETSGFIKKVGYNPKHVPFVPISGFNGDNMIEVSSNCPWYKGWEKETKAKATGKTLLEAIDAIDPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKGGMVVTFAPAGVT 283          
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 342.813 bits (878), Expect = 9.200e-94
Identity = 171/230 (74.35%), Postives = 190/230 (82.61%), Query Frame = 3
Query:    3 YAWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL 656
            YAWVLDKL AERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS+ARY+EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E S  + W+K            G  L+DALD I  P+RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P  L
Sbjct:   56 YAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISGWHGDNMLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNL 285          
The following BLAST results are available for this feature:
BLAST of CX296737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_TRIRE2.421e-9474.46Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A3_XENLA2.421e-9473.59Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A1_DROME2.421e-9474.46Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A0_XENLA2.421e-9473.59Elongation factor 1-alpha, somatic form OS=Xenopus... [more]
EF1A_NEUCR3.162e-9474.46Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A_ENTHI3.162e-9474.89Elongation factor 1-alpha OS=Entamoeba histolytica... [more]
EF1A_ABSGL3.162e-9473.59Elongation factor 1-alpha OS=Absidia glauca GN=TEF... [more]
EF1A1_OSCTI3.162e-9472.29Elongation factor 1-alpha 1 OS=Oscheius tipulae GN... [more]
EF1A_AURPU9.200e-9474.78Elongation factor 1-alpha OS=Aureobasidium pullula... [more]
EF1A2_DROME9.200e-9474.35Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]

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Properties
Property NameValue
Genbank descriptionC05802C03SK FerrChloL1 Citrus clementina cDNA clone C05802C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296737 ID=CX296737; Name=CX296737; organism=Citrus clementina; type=EST; length=661bp
AGTACGCCTGGGTGCTCGACAAGCTCACGGCTGAGCGTGAACGTGGTATT
ACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCAC
CGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCG
GTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGT
GGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTT
GCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGA
TGGACGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTG
AAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGT
CCCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGT
CTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGAC
AATATCAATGAGCCAAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACT
CCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCG
TTGAGACCGGTGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCT
GGATTGACAAC
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