CX296740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_LYSTE (40S ribosomal protein S3a OS=Lysiphlebus testaceipes PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.639e-45 Identity = 89/165 (53.94%), Postives = 117/165 (70.91%), Query Frame = -3 Query: 222 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE------DVGVKMERPA--DEPIPE 692 L NF GMD TTDKLRS+V+KW TLIEA+VDVKTTD Y LR+FCIGFT++ ++T YAQ SQ+R IRRKM I+ + CDLKG+V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD + G K++RP + P+ E Sbjct: 100 LCNFHGMDLTTDKLRSMVKKWQTLIEAHVDVKTTDGYLLRIFCIGFTQKDQMSTRKTSYAQHSQVRNIRRKMVSIVTDEITKCDLKGVVTKLVPDAIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSKTGEVGETGSKVDRPEGYEPPVQE 264 HSP 2 Score: 22.3274 bits (46), Expect = 4.639e-45 Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK RL EDVQ ++V Sbjct: 84 FRKFRLIVEDVQNRSV 99
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 4.642e-45 Identity = 91/154 (59.09%), Postives = 111/154 (72.08%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDK+RS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSGEEKGKKVSGFKDE 250 HSP 2 Score: 27.335 bits (59), Expect = 4.642e-45 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RKI+LR ++VQGKN+ Sbjct: 81 FRKIKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_BIPLU (40S ribosomal protein S3a OS=Biphyllus lunatus PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.046e-45 Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 219 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------DVGVKMERPA--DEPIPEA 692 LTNF GMD TTDKLRS+V+KW +LIEA DVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + DLK +V K + + I ++IEKA+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD + + G K+++P + P+ EA Sbjct: 100 LTNFHGMDLTTDKLRSMVKKWQSLIEASADVKTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVRSIRKKMVEIITRDISGSDLKEVVNKLLPDSIAKDIEKASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDSGKGGSGEPGEAGSKVDKPEGYEPPVQEA 266 HSP 2 Score: 28.1054 bits (61), Expect = 6.046e-45 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK RL AEDVQG+NV Sbjct: 84 FRKFRLIAEDVQGRNV 99
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_PLAF7 (40S ribosomal protein S3a OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.35 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.783e-45 Identity = 91/146 (62.33%), Postives = 109/146 (74.66%), Query Frame = -3 Query: 261 ECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 698 +C T+F G+ T DKL SL+RK +TLIE + DVKT DNY LRMFCI FTK+ NQ K TCYAQ SQI++IR+KM +IM A+A+ LK LV+KFI E IG+EIEK IYPLQNV IRKVKILK PK D+ KLME+H D E+ G Sbjct: 95 DCYTDFCGLSITRDKLCSLIRKGYTLIEGHTDVKTLDNYHLRMFCIAFTKKRQNQTKSTCYAQTSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDPKEESG 240
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_TRIAD (40S ribosomal protein S3a OS=Trichoplax adhaerens GN=TRIADDRAFT_36460 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.339e-44 Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = -3 Query: 231 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPADEP 692 LTNF GM T+DKL+SLV+KW TLIEA++D KTTD Y LR F IGFTK+ PNQ+K+T YA+ SQ R IR+KM +I+ + ++ DLK +V + I + IG++IEK+ SIYPL +V+IRKVK+LK PK D KL+E+HG+ S D G + R EP Sbjct: 96 LTNFHGMSMTSDKLKSLVKKWQTLIEAHIDAKTTDGYLLRFFAIGFTKKRPNQIKKTAYAKTSQCRSIRKKMTDIITREVSAIDLKEVVNRLIPDSIGKDIEKSCQSIYPLHDVYIRKVKVLKKPKLDTAKLLELHGEGVASSGDAGSAVRRDGYEP 252 HSP 2 Score: 23.0978 bits (48), Expect = 1.339e-44 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK RL AE+V GK+V Sbjct: 80 FRKFRLIAEEVLGKSV 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_LACTC (40S ribosomal protein S1 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.339e-44 Identity = 88/148 (59.46%), Postives = 107/148 (72.30%), Query Frame = -3 Query: 252 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 692 LTNF G+D TTDK RS+VRKW TLIEA V VKT D Y LR+F I FT+R PNQVK+ CYAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ Sbjct: 97 LTNFHGLDLTTDKYRSMVRKWQTLIEANVTVKTADEYVLRVFAIAFTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGEASGEEKGKKV 244 HSP 2 Score: 26.9498 bits (58), Expect = 1.339e-44 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_PLAYO (40S ribosomal protein S3a OS=Plasmodium yoelii yoelii GN=PY02291 PE=3 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44 Identity = 90/146 (61.64%), Postives = 108/146 (73.97%), Query Frame = -3 Query: 261 ECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 698 +C T+F G+ T DKL SL+RK +TLIE DVKT DNY LRMFCI FTK+ PNQ K TCYAQ SQI++IR+KM +IM A+A+ LK LV+K I E IG+E+EK I+PLQNV IRKVKILK PK D+ KLME+H D ED G Sbjct: 95 DCYTDFCGLSITRDKLCSLIRKGYTLIEGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLLKDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHSDPKEDSG 240
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.745e-44 Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = -3 Query: 225 CLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPADEPIP 695 CLTNF GM T DKL S+V+KWHTLIEA V VKT+D Y LR+FCIGFTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K+ERP D P Sbjct: 93 CLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIGFTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252 HSP 2 Score: 23.0978 bits (48), Expect = 1.745e-44 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = -1 Query: 698 YRKIRLRAEDVQGK 739 +RK+RL EDVQG+ Sbjct: 78 FRKMRLICEDVQGR 91
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.745e-44 Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = -3 Query: 252 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 692 LTNF G+DFTTDKLRS+VRKW TLIEA V VKT D+Y LR+F I FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ Sbjct: 97 LTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIAFTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGESSGEEKGKKV 244 HSP 2 Score: 26.9498 bits (58), Expect = 1.745e-44 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.274e-44 Identity = 88/154 (57.14%), Postives = 110/154 (71.43%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFT DKLRS+VRKW TLIEA V VKT+D Y +R+F I FT++ NQVKRT YAQ+S IR IR+ + +I+ + ++ L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTADKLRSMVRKWQTLIEANVTVKTSDEYIIRVFAIAFTRKQSNQVKRTAYAQSSHIRAIRKVISDILTREVSNSTLAQFTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSAEEKGKKVSGFKDE 250 HSP 2 Score: 28.4906 bits (62), Expect = 2.274e-44 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR +DVQGKN+ Sbjct: 81 FRKVKLRVDDVQGKNL 96 The following BLAST results are available for this feature:
BLAST of CX296740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296740 ID=CX296740; Name=CX296740; organism=Citrus clementina; type=EST; length=757bpback to top |