CX296740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 2.961e-44 Identity = 85/140 (60.71%), Postives = 108/140 (77.14%), Query Frame = -3 Query: 273 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 692 LTNF GM T DKL S+V+KW TLIEA VDVKTTD Y LR+F IGFTK+ NQVK+TCYAQ +Q++ IR+KM EI+ + +S D+K +V K I + IG++IEK+ IYPL +V I KVK+LK PKFD+GKLME+HG+ S Sbjct: 97 LTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGS 236 HSP 2 Score: 25.409 bits (54), Expect = 2.961e-44 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK +L AE+VQG+NV Sbjct: 81 FRKFKLIAEEVQGRNV 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 6.557e-44 Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250 HSP 2 Score: 26.9498 bits (58), Expect = 6.557e-44 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS7 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1B PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.557e-44 Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250 HSP 2 Score: 26.9498 bits (58), Expect = 6.557e-44 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS6 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1B PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.557e-44 Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250 HSP 2 Score: 26.9498 bits (58), Expect = 6.557e-44 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS1 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1B PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.557e-44 Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250 HSP 2 Score: 26.9498 bits (58), Expect = 6.557e-44 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_THEAN (40S ribosomal protein S3a OS=Theileria annulata GN=TA17795 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 8.542e-44 Identity = 83/145 (57.24%), Postives = 107/145 (73.79%), Query Frame = -3 Query: 261 CLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 695 CLT+F G T DKL SL+RK ++LIEA+ DVKT D Y LRMFC+G+TKR P Q+K TCY ++S++R I +KM +M +A++ LK LV+K I E IG+EIEKA SI+PLQNV +RK+K+LK PKFDL KLME H E+ G Sbjct: 96 CLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRMFCVGYTKRRPGQLKSTCYVRSSKVRLIHKKMVAVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFDLTKLMESHNYSGEEEG 240 HSP 2 Score: 27.7202 bits (60), Expect = 8.542e-44 Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 YRKI+L EDVQG+N Sbjct: 81 YRKIKLSCEDVQGRN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_MONBE (40S ribosomal protein S3a OS=Monosiga brevicollis GN=34920 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.543e-44 Identity = 90/167 (53.89%), Postives = 119/167 (71.26%), Query Frame = -3 Query: 207 ECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPADEPIPEAPTEV 698 ECLTNF GM TTDKLRSLV+KW +LIEA+VDVKT D Y LR+F IGFTK+ N ++TCYAQ++Q R +R KM EIM + A+CDLK V K + IG+EI+K SI+PLQ+V+IRKVK+LK P+FD+ KL+E+HG+ + D G + + + P+ T V Sbjct: 94 ECLTNFHGMSLTTDKLRSLVKKWRSLIEAFVDVKTNDGYVLRIFSIGFTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKCQSIFPLQDVYIRKVKVLKKPRFDVSKLLELHGEAGGVTADKGKTVAKSGEFVEPKPQTSV 259 HSP 2 Score: 21.557 bits (44), Expect = 8.543e-44 Identity = 6/13 (46.15%), Postives = 12/13 (92.31%), Query Frame = -1 Query: 701 YRKIRLRAEDVQG 739 +RK++L+ E++QG Sbjct: 80 FRKVKLQVEEIQG 92
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAST (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae GN=RPS1A PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 8.545e-44 Identity = 88/154 (57.14%), Postives = 110/154 (71.43%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250 HSP 2 Score: 27.335 bits (59), Expect = 8.545e-44 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RKI+LR ++VQGKN+ Sbjct: 81 FRKIKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 8.545e-44 Identity = 88/154 (57.14%), Postives = 110/154 (71.43%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250 HSP 2 Score: 27.335 bits (59), Expect = 8.545e-44 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RKI+LR ++VQGKN+ Sbjct: 81 FRKIKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS6 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1A PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 8.545e-44 Identity = 88/154 (57.14%), Postives = 110/154 (71.43%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250 HSP 2 Score: 27.335 bits (59), Expect = 8.545e-44 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RKI+LR ++VQGKN+ Sbjct: 81 FRKIKLRVDEVQGKNL 96 The following BLAST results are available for this feature:
BLAST of CX296740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296740 ID=CX296740; Name=CX296740; organism=Citrus clementina; type=EST; length=757bpback to top |