CX296740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A2_LEIIN (40S ribosomal protein S3a-2 OS=Leishmania infantum GN=LinJ35.0510 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.335e-25 Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = -3 Query: 216 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 692 LT F M+ TTDK+ SL+RKW T +E V+VKT D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V +R +E + AP Sbjct: 100 LTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASVEAD-QREVEEAVEAAP 257 HSP 2 Score: 24.6386 bits (52), Expect = 3.335e-25 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK+R ++VQG+N+ Sbjct: 84 YRKVRFTVQEVQGRNL 99
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A1_LEIIN (40S ribosomal protein S3a-1 OS=Leishmania infantum GN=LinJ35.0500 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.335e-25 Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = -3 Query: 216 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 692 LT F M+ TTDK+ SL+RKW T +E V+VKT D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V +R +E + AP Sbjct: 100 LTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASVEAD-QREVEEAVEAAP 257 HSP 2 Score: 24.6386 bits (52), Expect = 3.335e-25 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK+R ++VQG+N+ Sbjct: 84 YRKVRFTVQEVQGRNL 99
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_LEIBR (40S ribosomal protein S3a OS=Leishmania braziliensis GN=LbrM34_V2.0430 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.245e-24 Identity = 54/159 (33.96%), Postives = 88/159 (55.35%), Query Frame = -3 Query: 216 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 692 LT F M+ TTDK+ SL+RKW T +E V+V+T D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V R +E + AP Sbjct: 100 LTQFHSMEMTTDKMASLLRKWCTTMETTVEVRTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRVTKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPIVPLREMRIRKVRVVRTPKFDAQALLNAHGTIPTSVEAD-PREVEEAVEAAP 257 HSP 2 Score: 24.6386 bits (52), Expect = 1.245e-24 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK+R ++VQG+N+ Sbjct: 84 YRKVRFTVQEVQGRNL 99
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_ENCCU (40S ribosomal protein S1 OS=Encephalitozoon cuniculi GN=RPS1 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.400e-24 Identity = 50/126 (39.68%), Postives = 84/126 (66.67%), Query Frame = -3 Query: 321 ECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKA 698 EC+ F GM+ T+DK +++++KWHTLIEA D+ D R+F +G T+R P VK+TCY + S ++IR+ M +++ + + CD++ +++K E +G+ IE+ I+PLQN +RKVK +K+ Sbjct: 47 ECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIKS 172
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A2_TRYCR (40S ribosomal protein S3a-2 OS=Trypanosoma cruzi GN=Tc00.1047053511001.9 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.051e-24 Identity = 55/161 (34.16%), Postives = 91/161 (56.52%), Query Frame = -3 Query: 219 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKMERPADEPIPEA 692 LT F M+ T+D++ L+RKW T IEA V+ KT D YTLR+F I FTK+ NQ+ + CYA+ ++ +R ++ ++ + + ++ V I+ + K I PL+++ IRKVK+++ P+FD L+ HG+ +E +E + P EA Sbjct: 99 LTQFHSMEMTSDRVYFLLRKWCTTIEAAVEAKTADGYTLRLFVIAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGEIPASAEGEARVVEEAQEAPAAEA 259 HSP 2 Score: 22.7126 bits (47), Expect = 6.051e-24 Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK++ ++VQG+N+ Sbjct: 83 YRKVKFVVQEVQGRNL 98
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A1_TRYCR (40S ribosomal protein S3a-1 OS=Trypanosoma cruzi GN=Tc00.1047053503635.59 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.051e-24 Identity = 55/161 (34.16%), Postives = 91/161 (56.52%), Query Frame = -3 Query: 219 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKMERPADEPIPEA 692 LT F M+ T+D++ L+RKW T IEA V+ KT D YTLR+F I FTK+ NQ+ + CYA+ ++ +R ++ ++ + + ++ V I+ + K I PL+++ IRKVK+++ P+FD L+ HG+ +E +E + P EA Sbjct: 99 LTQFHSMEMTSDRVYFLLRKWCTTIEAAVETKTADGYTLRLFVIAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGEIPASAEGEARVVEEAQEAPAAEA 259 HSP 2 Score: 22.7126 bits (47), Expect = 6.051e-24 Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK++ ++VQG+N+ Sbjct: 83 YRKVKFVVQEVQGRNL 98
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_NOSCE (40S ribosomal protein S1 OS=Nosema ceranae (strain BRL01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = -3 Query: 279 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 701 ++C+ F GM T+DK++ ++RKWHTLIEA D+ D LR+F TK+ P + Y + S+ ++IR+ M +++ + DL +++K AE+IG+ +EK IYPLQN + KVK +K K D ME+ + Sbjct: 96 KDCIGVFDGMHMTSDKVKGIIRKWHTLIEAEKDIVAKDGTILRVFVNAVTKKTPTCTSKRVYCKTSEEKKIRKVMFDVIEEELKGEDLNKIMKKLAAEVIGKSVEKKGSLIYPLQNCCVIKVKTVKRGK-DTSNAMEIEAN 235
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_GUITH (40S ribosomal protein S3a OS=Guillardia theta PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = -3 Query: 324 KS*RCPREECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILK 722 KS + EC T F G+ T DK+ SL++KWHTLIE V+ KT D Y L++F I +K+ N +T Y +SQ R +RR++ +I+I + + D+K + + + I +IE I+P+ V IRK+K+++ Sbjct: 83 KSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_GIALA (40S ribosomal protein S3a OS=Giardia lamblia GN=GL50803_16265 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = -3 Query: 285 ECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 698 +CLTNF GMD T K SL RK I+ ++D+ TTD Y LR+F I FT R Q ++ C+ + IR +R + E + + + LV K + ++ +A I ++V IR+VK++K P+ + L +H Sbjct: 95 KCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_METTP (30S ribosomal protein S3Ae OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15 Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = -3 Query: 318 TNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAP 689 T F G + TTD +RSLV++ + I+A VDV T+D Y +R+ FT VKR A+A+Q++ IR R+++I++A + DL GL+++ + + +I K ++YPL+ V IRK +IL P Sbjct: 79 TKFIGHEMTTDYIRSLVKRRTSRIDAVVDVTTSDGYLVRVKPSCFT------VKR---ARANQVKAIREISRQVIISRAGNIDLNGLIQEVVLGKLSLDIYKDAKAVYPLRRVEIRKTEILAGP 193 The following BLAST results are available for this feature:
BLAST of CX296740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296740 ID=CX296740; Name=CX296740; organism=Citrus clementina; type=EST; length=757bpback to top |