CX296746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_PORPU (Photosystem I reaction center subunit II OS=Porphyra purpurea GN=psaD PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.856e-48 Identity = 94/140 (67.14%), Postives = 105/140 (75.00%), Query Frame = 2 Query: 269 PPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR + SIGKNV+PI VKFT KA YD Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLYLAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHSIGKNVNPINVKFTNKATYD 141
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_PORYE (Photosystem I reaction center subunit II OS=Porphyra yezoensis GN=psaD PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.365e-47 Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 2 Query: 269 PPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL LA+KEQCLALGT+L+SK+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR V SIG+N++P++VKF KA YD Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRNGENLLYLAKKEQCLALGTQLKSKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNTGRASVNSVDHSIGQNINPVDVKFMNKATYD 141
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_MASLA (Photosystem I reaction center subunit II OS=Mastigocladus laminosus GN=psaD PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46 Identity = 88/130 (67.69%), Postives = 104/130 (80.00%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 +PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MRQG NLL LARKEQC+ALG++LR Y+ YR++PNGE Y+HP DGV+PEKVNPGRQ V N R IG+N P ++KF+G A YD Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIALGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAKLKFSGVATYD 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_ODOSI (Photosystem I reaction center subunit II OS=Odontella sinensis GN=psaD PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.181e-46 Identity = 92/136 (67.65%), Postives = 104/136 (76.47%), Query Frame = 2 Query: 278 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LARKEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGKN +P +KF+G Y+ Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_SKECO (Photosystem I reaction center subunit II OS=Skeletonema costatum GN=psaD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.412e-45 Identity = 90/136 (66.18%), Postives = 103/136 (75.74%), Query Frame = 2 Query: 278 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LARKEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGKN +P +KF+G Y+ Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLARKEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_SYNY3 (Photosystem I reaction center subunit II OS=Synechocystis sp. (strain PCC 6803) GN=psaD PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.114e-45 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 299 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYDL 688 P FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K K Y+ YRV+P+GEVQYLHP DGV+PEKVN GR+ G R IG+N P+ +KF+GKA Y++ Sbjct: 9 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEPVTIKFSGKAPYEV 141
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_SYNP6 (Photosystem I reaction center subunit II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaD PE=1 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41 Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVY 682 +P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NLL ARKEQ LALGT+LR+K+K K Y+ YR FP +V YLHPKDGV+PEKVN GR G R IG+N +P +KFTGK Y Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALALGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPNPATIKFTGKQPY 140
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_CYACA (Photosystem I reaction center subunit II OS=Cyanidium caldarium GN=psaD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.147e-41 Identity = 80/136 (58.82%), Postives = 102/136 (75.00%), Query Frame = 2 Query: 278 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVY 682 L+ PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+KEQCLALG +L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G +IGKN++P EVKFT K ++ Sbjct: 5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIGKNLNPAEVKFTHKTIF 140
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_NOSS8 (Photosystem I reaction center subunit II OS=Nostoc sp. (strain PCC 8009) GN=psaD PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.789e-40 Identity = 83/131 (63.36%), Postives = 100/131 (76.34%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 +P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M QG NLL LARKEQ +ALG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GR+ V R IG+N SP ++KF+GK YD Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIALGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPAQLKFSGKYTYD 137
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_ANAVT (Photosystem I reaction center subunit II OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaD PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40 Identity = 81/131 (61.83%), Postives = 101/131 (77.10%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M +G NLL +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGR+ V N RSIG+N +P +VKF+GKA YD Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPSQVKFSGKATYD 138 The following BLAST results are available for this feature:
BLAST of CX296746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296746 ID=CX296746; Name=CX296746; organism=Citrus clementina; type=EST; length=709bpback to top |