CX296746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_THEVL (Photosystem I reaction center subunit II OS=Thermosynechococcus vulcanus GN=psaD PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40 Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 2 Query: 299 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P ++KFTGK YD Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_THEEB (Photosystem I reaction center subunit II OS=Thermosynechococcus elongatus (strain BP-1) GN=psaD PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40 Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 2 Query: 299 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P ++KFTGK YD Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_SYNEN (Photosystem I reaction center subunit II OS=Synechococcus elongatus naegeli GN=psaD PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40 Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 2 Query: 299 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P ++KFTGK YD Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_ANASP (Photosystem I reaction center subunit II OS=Anabaena sp. (strain PCC 7120) GN=psaD PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 80/131 (61.07%), Postives = 100/131 (76.34%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M +G NLL +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V N RSIG+N +P +VKF+GKA YD Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPSQVKFSGKATYD 138
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_FREDI (Photosystem I reaction center subunit II OS=Fremyella diplosiphon GN=psaD PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38 Identity = 79/131 (60.31%), Postives = 98/131 (74.81%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYD 685 +P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M+QG NLL LARKE +ALG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GR+ V R IG+N +P +KF+GK YD Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIALGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNPSAIKFSGKYTYD 137
BLAST of CX296746 vs. ExPASy Swiss-Prot
Match: PSAD_GLOVI (Photosystem I reaction center subunit II OS=Gloeobacter violaceus GN=psaD PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37 Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 2 Query: 296 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKAVYDL 688 +P+FGGSTGGLLRKAQ+EE Y+I W S +EQ+FEMPTGGAA M G N+L LARKEQC AL +L S +KI+ + YRV+PNGE + P DGV EK NPGR+ VG R IG N +P++VKFTGK +D+ Sbjct: 13 TPLFGGSTGGLLRKAQIEEKYLIVWNSKEEQVFEMPTGGAATMVAGTNVLYLARKEQCHALHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSNPGREVVGYVPRKIGDNPNPVDVKFTGKETFDV 144 The following BLAST results are available for this feature:
BLAST of CX296746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296746 ID=CX296746; Name=CX296746; organism=Citrus clementina; type=EST; length=709bpback to top |