CX296747

Overview
NameCX296747
Unique NameCX296747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.084e-13
Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 2
Query:   41 IDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKKAEG 253
            ID I  A+ VI ALQQ ISR  +PL+ +VLS+  + GG A N+I   V   GT+RSL  E   QL +  EG
Sbjct:  204 IDAIWIAAQVITALQQAISRTQNPLRPMVLSLGQISGGRAPNVIADQVRMAGTVRSLHPETHAQLPQWIEG 274          

HSP 2 Score: 40.817 bits (94), Expect = 1.084e-13
Identity = 27/92 (29.35%), Postives = 39/92 (42.39%), Query Frame = 3
Query:  330 PATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAG-EDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 602
            P+  ND  L+ L+E   +   G   +    +   G EDFA Y +  PG M  +G    ++   HP H P F  DE  +  G    +  A  Y
Sbjct:  296 PSVQNDAQLNKLLENAVREAWGESALQIIPEPSLGAEDFALYLEHAPGAMFRLGTGFGDRQMNHPLHHPRFEADEAAILTGVVTLSYAAWQY 387          
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: YTNL_BACSU (Uncharacterized hydrolase ytnL OS=Bacillus subtilis GN=ytnL PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.827e-13
Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 2
Query:   44 DPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKK 244
            DPI+ AS +I+ALQ ++SR  +PLQS +L+V  + GG+ +N+IP  V   GT+R+  +E   Q++++
Sbjct:  231 DPIIGASQLIVALQTIVSRNVNPLQSAILTVGKINGGSTWNVIPDTVVIEGTVRTFDSEVRNQVKQR 297          

HSP 2 Score: 36.1946 bits (82), Expect = 1.827e-13
Identity = 31/108 (28.70%), Postives = 45/108 (41.67%), Query Frame = 3
Query:  237 KKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVL 560
            K+R   V +Q +A  S  A +    + H   P   ND+++  LV            V +     AGEDFA+Y + IPG     G   +     H  H P F +DE  +
Sbjct:  295 KQRFFAVTEQISAAFSLKANV----KWHSGPPPLCNDEAITGLVRDAAHK--AKLQVIDPAPSTAGEDFAYYLEHIPGSFAFFGTDGD-----HDWHHPAFTIDETAI 391          
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: DAPL_BACSU (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus subtilis GN=dapL PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.484e-12
Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 2
Query:   44 DPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKKAE 250
            D ++ AS+++  LQ +ISR  DPL S V++V  + GG+A NII       GT+R+L+ E + Q++++ E
Sbjct:  197 DMVVAASTLVTQLQTIISRNTDPLDSAVITVGTITGGSAQNIIAETAHLEGTIRTLSEESMKQVKERIE 265          

HSP 2 Score: 36.965 bits (84), Expect = 1.484e-12
Identity = 30/125 (24.00%), Postives = 53/125 (42.40%), Query Frame = 3
Query:  237 KKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT-VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 608
            K+R+++VVK       C   +      H  Y  + + ++ +  + E    +++      EAK+ M GEDF +  +  PG M  +G  + E G  H   +P    DE+ +     + T     Y N
Sbjct:  261 KERIEDVVKGIEIGFRCKGKVTYPSVYHQVYNTSGLTEEFMSFVAEHQLATVI------EAKEAMTGEDFGYMLKKYPGFMFWLG-ADSEHGLHHAKLNP----DENAIETAVHVMTGYFSVYAN 374          
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.235e-12
Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 2
Query:   44 DPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKKAE 250
            D ++ AS+++  LQ +ISR  DPL S V++V  + GGTA NII       GT+R+L+ E +  ++K+ E
Sbjct:  197 DMVVAASTLVTQLQTVISRNTDPLDSAVITVGTITGGTAQNIIAEHAHLEGTIRTLSEESMRMVKKRIE 265          

HSP 2 Score: 33.113 bits (74), Expect = 9.235e-12
Identity = 31/124 (25.00%), Postives = 46/124 (37.10%), Query Frame = 3
Query:  237 KKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 608
            KKR++E+VK       C   +      H  Y  +   +     ++ V    L   +V  AK+ M GEDF +  +  PG M  +G       S H  H      DED +     +       Y N
Sbjct:  261 KKRIEELVKGIEIGFRCKGKVTYPSVYHQVYNTSGLTEEF---MQFVSDHQLA--DVRTAKEAMTGEDFGYMLKKYPGFMFWLG-----ADSSHGLHHAKLNPDEDAMETAVNVMVGYFSKYAN 374          
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.199e-11
Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 2
Query:   44 DPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKKAEG---GCEAAGSC 277
            D ++ AS+++  LQ +ISR  DPL S V+++  + GGTA NII    +  GT+R+L+ E + +++K+ E    G E    C
Sbjct:  198 DMVVAASALVGQLQSVISRNVDPLDSAVITIGTITGGTAQNIIAQHAKLDGTIRTLSPESMEKVRKRIEALAKGIEIGYEC 278          

HSP 2 Score: 32.3426 bits (72), Expect = 1.199e-11
Identity = 14/36 (38.89%), Postives = 21/36 (58.33%), Query Frame = 3
Query:  393 GPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNE 500
            G  NV E ++ M GEDF +  +  PG M  +G+ +E
Sbjct:  309 GLANVVECREAMTGEDFGYMLKKYPGFMFWLGVDSE 344          
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 48.9062 bits (115), Expect = 1.553e-11
Identity = 32/122 (26.23%), Postives = 55/122 (45.08%), Query Frame = 3
Query:  237 KKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 602
            +K ++ VVK   ++H  +     ++     YPA VN  +    +    K+  G + V + +  M GEDFA+Y Q + G     G   E+   ++  H P F ++E  +   A +    A TY
Sbjct:  276 EKEIEAVVKGICSMHGASYEYTYEQG----YPAVVNHPAETNHLVSTAKNTEGVQQVIDGEPQMGGEDFAYYLQNVKGTFFFTGAAPEQPERVYSHHHPKFDINEKAMLTAAKVLAGAAITY 393          

HSP 2 Score: 41.2022 bits (95), Expect = 1.553e-11
Identity = 24/77 (31.17%), Postives = 38/77 (49.35%), Query Frame = 2
Query:   20 GCNAPFTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKKAE 250
            G +   T D +L  S ++ +LQ ++SR+ +P+QS V+S         FN+I       GT RS        L+K+ E
Sbjct:  204 GAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQSAVISTGSFIADNPFNVIADQAVLIGTARSFDENVRDILEKEIE 280          
BLAST of CX296747 vs. ExPASy Swiss-Prot
Match: Y4TI_RHISN (Uncharacterized hydrolase y4tI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01500 PE=3 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 3.397e-11
Identity = 30/107 (28.04%), Postives = 51/107 (47.66%), Query Frame = 3
Query:  240 KRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVL 560
            +R++E+ +  AA+H   A + +   E    PA +ND  +  L       + G   + + K +   +DF FY Q IP +    G  + E G+    H+P F + +DVL
Sbjct:  281 QRVREIAEGVAALHRGKAEVVVTSGE----PAVINDPEMVRLFRDAVSDMAGSDALTQGKAISGSDDFGFYSQCIPSIYFWFG--SGEPGNESGVHTPTFAVSDDVL 381          

HSP 2 Score: 39.2762 bits (90), Expect = 3.397e-11
Identity = 22/60 (36.67%), Postives = 34/60 (56.67%), Query Frame = 2
Query:   41 IDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTE 220
            ID I  A++ +  +Q++ISRE       V+++  + GG A NII P V   GT+R+   E
Sbjct:  215 IDAITIAAAFVNEVQKVISREVPVDDRSVITIGTIHGGEATNIICPKVVMEGTIRTTNPE 274          
The following BLAST results are available for this feature:
BLAST of CX296747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
Y100_SYNY31.084e-1347.89Uncharacterized hydrolase sll0100 OS=Synechocystis... [more]
YTNL_BACSU1.827e-1341.79Uncharacterized hydrolase ytnL OS=Bacillus subtili... [more]
DAPL_BACSU1.484e-1239.13Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACA29.235e-1240.58Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACP21.199e-1137.04Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
YHAA_BACSU1.553e-1126.23Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]
Y4TI_RHISN3.397e-1128.04Uncharacterized hydrolase y4tI OS=Rhizobium sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC05802D01SK FerrChloL1 Citrus clementina cDNA clone C05802D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296747 ID=CX296747; Name=CX296747; organism=Citrus clementina; type=EST; length=741bp
CGTGCCGAATTCGGCATGAGGCTGCAATGCCCCATTCACAATCGATCCTA
TACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTTATTTCAAGA
GAAGCAGATCCCCTCCAAAGTCTAGTGTTGTCTGTTACTTATGTTAGAGG
GGGAACTGCATTTAATATAATTCCACCGTTTGTTGAATTTGGAGGCACTT
TGAGGAGTCTTACAACTGAGGGCTTGTATCAACTCCAAAAAAAGGCTGAA
GGAGGTTGTGAAGCAGCAGGCAGCTGTACACAGTTGTAATGCATTTATTG
ACCTGAAAGAGGAAGAGCACCCACCATATCCTGCTACTGTGAACGATGAT
AGCTTGCATCTGCTTGTCGAGAGGGTTGGCAAATCTTTGCTTGGTCCCAA
GAATGTAGGTGAGGCCAAGAAGGTTATGGCTGGGGAGGACTTTGCCTTTT
ATCAGCAACTGATCCCTGGAGTCATGCTTAGCATTGGAATTAGAAATGAG
GAAAAGGGTTCAATTCACCCTCCGCACTCCCCATACTTCTTTCTTGATGA
GGATGTCCTGCCAATTGGAGCGGCATTATACACTAATCTTGCAGAAACAT
ATCTGAATGAGCACCAACATTTCAATGTACAGTAAAATTGTAAGAAATGG
CAAATTTTAATCCCTGTTCTCAAATCATTCTTAACTTTGTAATATTGTAA
ATGCATGGAGGCGTAGATTTTTACTTGCCCCGCAAAACAAG
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