CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.805e-20
Identity = 60/176 (34.09%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DPVV +   L PF  Q ++ G +P +        ++  PEE+ ++ L +++  AE  L  P+ N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          + G   E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   69 VFDAKRLIGRKFNDPVVQSDMKLWPF--QVINEGGKPKVLVSYKGENKAFYPEEISSMVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL--------DKGGRGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV A  K  PF V  V  G +P +        +S  PEE+ ++ LV++R +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          + G   E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   69 VFDAKRLIGRKFNDQVVQADMKHWPFKV--VSDGGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGM--------DKGMSRERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 63/176 (35.80%), Postives = 98/176 (55.68%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV +  K  PF  Q V+ G +P +        RS  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y         +  G G E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFGDAVVQSDMKHWPF--QVVNDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL-------DRTGKG-ERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 61/176 (34.66%), Postives = 99/176 (56.25%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DPVV +  K  PF V  ++ G +P +        ++  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y         +  G G E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFGDPVVQSDMKHWPFRV--INDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL-------DRTGKG-ERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 63/176 (35.80%), Postives = 98/176 (55.68%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV +  K  PF  Q V+ G +P +        RS  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y         +  G G E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFGDAVVQSDMKHWPF--QVVNDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL-------DRTGKG-ERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 61/176 (34.66%), Postives = 99/176 (56.25%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DPVV +  K  PF V  ++ G +P +        ++  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y         +  G G E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFGDPVVQSDMKHWPFRV--INDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL-------DRTGKG-ERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.021e-20
Identity = 64/181 (35.36%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   D VV A  K  PF V  +  G RP +        ++  PEE+ ++ LV+++ +AE  L + I N V+T+P  F+  Q  R + A  ++GL+VLR++ EPTA A+ Y              GSE+  +IF++G G  DV++     G+  +K+ +G   +GGED    M
Sbjct:   67 IFDAKRLIGRRFEDSVVQADMKHWPFKV--ISDGGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAYGLDKKV--------GSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.252e-20
Identity = 63/176 (35.80%), Postives = 100/176 (56.82%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D  V A  K  PF  Q V  G +P +        +S  PEE+ ++ L +++  AE  L +P+++ V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ +         +  G+G E+  +IF++G G  DV+V +   GV ++KA +G   +GGED
Sbjct:   69 VFDAKRLIGRKFADATVQADMKHWPF--QVVSEGCKPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAHGL-------DRRGAG-ERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.252e-20
Identity = 61/181 (33.70%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DPVV    K  PF  Q V    +P +        +S  PEE+ ++ L +++  AE  L  P+ N V+T+P  F+  Q    + A  +AGL++LR++ EPTA A+ Y          + G+  E+  +IF++G G  DV++     G+ ++KA +G   +GGED    M
Sbjct:   68 VFDAKRLIGRKFNDPVVQCDLKHWPF--QVVSDEGKPKVKVEYKGEEKSFFPEEISSMVLTKMKETAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVLAGLNILRIINEPTAAAIAYGL--------DKGARGEQNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRM 238          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 6.859e-20
Identity = 60/176 (34.09%), Postives = 100/176 (56.82%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDP-VVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V++ +K  PF V  +D   +P I        ++ +PEE+ ++ L +++ +AE  L   +++ V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y         +  GS  E   +IF++G G  DV++ A   G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFDDPEVINDAKHFPFKV--IDKAGKPVIQVEYKGETKTFSPEEISSMVLTKMKEIAEGYLGSTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL-------DKKGSRGEHNVLIFDLGGGTFDVSLLAIDEGIFEVKATAGDTHLGGED 231          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71L_MACFA1.805e-2034.09Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP70_ONCTS2.357e-2035.80Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS71B_MOUSE2.357e-2035.80Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71B_BOVIN2.357e-2034.66Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71A_MOUSE2.357e-2035.80Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HS71A_BOVIN2.357e-2034.66Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP7C_ICTPU4.021e-2035.36Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP76_SAGOE5.252e-2035.80Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP70_XENLA5.252e-2033.70Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP71_CANAL6.859e-2034.09Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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