CX296750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q + A +AGL+V+R++ EPTA A+ Y EK ++F++G G DV++ GV ++ A +G +GGED Q + Sbjct: 92 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 262
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q + A +AGL+V+R++ EPTA A+ Y EK ++F++G G DV++ GV ++ A +G +GGED Q + Sbjct: 92 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 262
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q + A +AGL+V+R++ EPTA A+ Y EK ++F++G G DV++ GV ++ A +G +GGED Q + Sbjct: 93 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 263
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q + A +AGL+V+R++ EPTA A+ Y EK ++F++G G DV++ GV ++ A +G +GGED Q + Sbjct: 92 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 262
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q + A +AGL+V+R++ EPTA A+ Y EK ++F++G G DV++ GV ++ A +G +GGED Q + Sbjct: 92 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 262
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 54/176 (30.68%), Postives = 98/176 (55.68%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566 +F++KRLIG D +V K LP+ + D +P + N+ ++ +PEE+ + L +++++AE + + I + V+T+P F+ Q + A +AGL+VLR++ EPTA A+ Y + EK +++++G G DV++ + GGV ++ A +G +GGED Sbjct: 112 VFDIKRLIGLKYNDKMVQKEIKHLPYKIDKKD--GKPVVKVEFNDETKTFSPEEISGMILTKMKSIAEEYMGKKITHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDK---------TEGEKQIIVYDLGGGTFDVSLLSIEGGVFEVLATAGDTHLGGED 276
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 59/176 (33.52%), Postives = 95/176 (53.98%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566 IF+ KRLIGR DP V + K PF V + D +P + ++ TPEE+ ++ L+++R AE L + + V+T+P F+ Q + A +AGL+VLR++ EPTA A+ Y + + E +IF++G G DV++ G+ ++KA +G +GGED Sbjct: 65 IFDAKRLIGRKFDDPEVQSDMKHWPFKVISKD--GKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL--------DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 230
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 58/181 (32.04%), Postives = 96/181 (53.04%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 IF+ KRLIGR D V + K PF V V G +P + ++ PEE+ ++ L +++ +AE L + + V+T+P F+ Q + A + GL+VLR++ EPTA A+ Y + + +G EK +IF++G G DV++ G+ ++K+ +G +GGED M Sbjct: 68 IFDAKRLIGRKFEDATVQSDMKHWPFRV--VSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY------GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 58/181 (32.04%), Postives = 97/181 (53.59%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 IF+ KRLIGR D V + K PF V V G +P + ++ PEE+ ++ L +++ +AE L +++ V+T+P F+ Q + A + GL+VLR++ EPTA A+ Y + + +G EK +IF++G G DV++ G+ ++K+ +G +GGED M Sbjct: 68 IFDAKRLIGRKFEDATVQSDMKHWPFRV--VSEGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY------GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 57/181 (31.49%), Postives = 96/181 (53.04%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F+ KRLIGR DP V + K PF + +G + I + + EE+ ++ L +++ +AE+ L R + + V+T+P F+ Q + A A+AGL+VLR++ EPTA A+ Y G E+ +IF++G G DV++ G+ ++K+ +G +GGED M Sbjct: 65 VFDAKRLIGRRFDDPSVQSDMKHWPF--EVTQVGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTVSDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKV--------GGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 235 The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bpback to top |