CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17
Identity = 59/176 (33.52%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR   DP V +  K  PF V  ++   +P I        ++ TPEE+ ++ L+++R  AE  L   + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          N+        +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   65 IFDAKRLIGRRFNDPEVQSDMKHWPFKV--IEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNV--------LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_CAUCR (Chaperone protein dnaK OS=Caulobacter crescentus GN=dnaK PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F +KRLIGR  +DPVV   K + P+     +I   P   A V    +  +P+EV A  L +++  AE  L  P+   V+T+P  F+  Q    + A  +AGL VLR++ EPTA AL Y           L     K   ++++G G  DV++     GV ++K+ +G   +GGED
Sbjct:   66 LFAIKRLIGRTASDPVVEKDKGMVPY-----EIVKGPTGDAWVKAHGKDYSPQEVSAFILQKMKEAAEAHLGEPVTKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAY----------GLDKNDGKKIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGED 226          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17
Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR   D  V   K L P+ +   D   +P+I   + +      +PEE+ A+ L +++  AE  L + I++ V+T+P  F+  Q    + A  +AGL+V R++ EPTA A+ Y              G EK  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   99 IFDVKRLIGRKFDDKEVQRDKKLVPYEIVNKD--GKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDK---------KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRI 269          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 58/181 (32.04%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  +D  V A  K  PF V +   G +P I        +    EE+ ++ L +++ +AE  L   ++N V+T+P  F+  Q    + A  ++GL+V+R++ EPTA A+ Y       + +   S  EK  +IF++G G  DV++     G+ ++KA +G   +GGED    M
Sbjct:   70 VFDAKRLIGRRFSDASVQADMKHRPFKVVSGP-GEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAY------GLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 243          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 58/176 (32.95%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D  V    K  PF V  VD   +P I        ++ +PEE+ ++ L +++  AE  L   +++ V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y          +  S +EK  +IF++G G  DV++ +   G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFDDHEVQGDIKHFPFKV--VDKASKPMIQVEYKGETKTFSPEEISSMILGKMKETAEGFLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL--------DKKSEAEKNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 56/176 (31.82%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D  V +  K  PF V   D G +P+I        +  +PEE+ ++ L +++ +AE+ L   + + V+T+P  F+  Q    + A  ++GL+VLR++ EPTA A+ Y          +  +  E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFADAEVQSDIKHFPFTV--FDKGGKPYIRVQYRGEDKEFSPEEISSMILTKMKEVAESYLGGTVTSAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL--------DKKTVGERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 58/176 (32.95%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR   D  V    K  PF V     G +P I        ++   EE+ ++ L +++ +AE+ L + +++VV+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y          +   G EK  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   66 IFDAKRLIGRKFDDRTVQEDMKHWPFKVTNGPNG-KPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAESFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL--------DKKGGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D  V A  K  PF V  ++   +P          +  TPEE+ ++ L ++R  AE+ L   + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y                EK  +IF++G G  DV+      G+ ++K+ +G   +GGED
Sbjct:   65 VFDAKRLIGRKFQDAEVQADMKHFPFKV--IEKAGKPVTQVEFKGETKDFTPEEISSMILTKMRETAESYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDKKQE--------GEKNVLIFDLGGGTFDVSFLTIEEGIFEVKSTAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 61/182 (33.52%), Postives = 94/182 (51.65%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP V    K LPF V  V+   +P I   V      T  PEE+ A+ L +++  AE  L + + + V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y                EK  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   90 VFDAKRLIGRTWNDPSVQQDIKYLPFKV--VEKKAKPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 260          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 61/182 (33.52%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR   D  V    K +P+ +   D   +P+I   V        +PEE+ A+ L +++  AET L + I++ V+T+P  F+  Q    + A  +AGL+V R++ EPTA A+ Y              G EK  ++F++G G  DV+V     GV ++ A +G   +GGED  Q +
Sbjct:   99 IFDVKRLIGRKFEDKEVQKDMKLVPYKIVNRD--GKPYIQVKVQEGETKVFSPEEISAMILTKMKETAETFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDK---------RGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRL 269          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_SCHPO2.440e-1733.52Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
DNAK_CAUCR2.440e-1733.52Chaperone protein dnaK OS=Caulobacter crescentus G... [more]
BIP5_TOBAC2.440e-1732.42Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
HSP7E_SPIOL3.186e-1732.04Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_CANAL3.186e-1732.95Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP71_PUCGR3.186e-1731.82Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_THEAN3.186e-1732.95Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_CLAHE3.186e-1732.95Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
GRP78_CHICK3.186e-1733.5278 kDa glucose-regulated protein OS=Gallus gallus ... [more]
BIP_SPIOL3.186e-1733.52Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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