CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17
Identity = 57/176 (32.39%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR   D  V +  K  PF V + D   +P I     +  ++  PEE+ ++ L +++  AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          +  +  E+  +IF++G G  DV++ +   G+ ++K+ +G   +GGED
Sbjct:   67 IFDAKRLIGRKFDDAAVQSDMKHWPFEVVSAD--GKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL--------DKKAVGERNVLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17
Identity = 57/176 (32.39%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V   +K  PF V + D   +P +        ++ TPEE+ ++ L +++  AE  L   + + V+T+P  F+  Q    + A  +AG++VLR++ EPTA A+ Y          N+        +IF++G G  DV++ +   GV ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFDDPEVTTDAKHFPFKVISRD--GKPVVQVEYKGETKTFTPEEISSMVLSKMKETAENYLGTTVNDAVVTVPAYFNDSQRQATKDAGTIAGMNVLRIINEPTAAAIAYGLDKKGRAEHNV--------LIFDLGGGTFDVSLLSIDEGVFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17
Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D  V +  K  PF V +V  G +P I        ++ TPEE+ ++ L+++R  AE  L   +++ V+T+P  F+  Q    + A  ++GL+V+R++ EPTA A+ Y          +  +  EK  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFDDAEVQSDMKHWPFEVTSV--GGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNVMRIINEPTAAAIAYGL--------DKKTEGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17
Identity = 58/176 (32.95%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR   D  V    K  PF V     G +P I        ++   EE+ ++ L +++ +AE  L + +++VV+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y          +   G EK  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   66 IFDAKRLIGRKFDDRTVQEDMKHWPFKVTNGPNG-KPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAEAFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL--------DKKGGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17
Identity = 57/177 (32.20%), Postives = 99/177 (55.93%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPF-IAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALS-GSAIGGED 566
            +F+ K LIGR  +DP+V A  K  PF + +   G R   I        ++  PEE+ ++ L+++R +AE  + + ++N V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y              G E+  +IF++G G  DV++ +   G+ ++K+ +  + +GGED
Sbjct:   70 VFDAKPLIGRKFSDPIVQADIKHWPFKLTS---GWRQAQIVVQFKGESKTFQPEEISSMVLIKMREVAEAFIGKEVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDK---------KGGERNVLIFDLGGGTFDVSLLSIEEGIFEVKSTARDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17
Identity = 59/177 (33.33%), Postives = 98/177 (55.37%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAV-IFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR  +D VV +  K  PF V T     +P I        ++ +PEE+ ++ L +++  AE+ L +P+ N V+T+P  F+  Q    + A  ++ L+V R++ EP+A A+ Y         +  GS S +I V IF++G G  DV++ +   GV ++ A +G   +GGED
Sbjct:   64 VFDAKRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISSMVLSKMKETAESYLGKPVNNAVITVPAYFNDGQRQATKDAGTISKLNVQRIINEPSAAAIAYGL-------DKKGSKSGEIKVLIFDLGGGTFDVSLLSIDDGVFEVLATAGDTHLGGED 233          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D  V    K  PF V  ++   +P++   V +  +   PEEV A+ L +++ +AE  L   + + V+T+P  F+  Q    + A A+AGL VLR++ EPTA A+ Y               +EK  ++F++G G  DV++     GV ++ A SG   +GGED  Q +
Sbjct:   92 LFDAKRLIGRDYDDKDVQGDIKRYPFKV--INKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVLRIINEPTAAAIAYGLDK---------KDTEKNILVFDLGGGTFDVSLLTIDNGVFEVVATSGDTHLGGEDFDQRL 261          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.098e-17
Identity = 62/176 (35.23%), Postives = 93/176 (52.84%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR   D  V +  K  PF V   +   +P I        +S  PEEV ++ L ++R  AE  L   + + V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y      +        SE+  +IF++G G  DV+V     G+ ++KA +G   +GGED
Sbjct:   67 IFDAKRLIGRRFDDATVQSDMKHWPFEVFAEN--GKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGT--------SERNVLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.098e-17
Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV A  K   F V  V+   +P          ++ TPEE  ++ L +++  AE  L   + + V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y         +      EK  +IF++G G  DV++     G+ ++KA +G   +G ED
Sbjct:   70 VFDAKRLIGRRFDDDVVQADMKHWSFTV--VNKNSKPLFQVEFKGETKTFTPEEFSSMILTKMKETAEAYLGTKVNHAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL-------DKKAEAGEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGAED 236          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.098e-17
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D  V    K  PF V  ++   +P++   V +  +   PEEV A+ L +++ +AE  L   + + V+T+P  F+  Q    + A A+AGL VLR++ EPTA A+ Y               +EK  ++F++G G  DV++     GV ++ A SG   +GGED  Q +
Sbjct:   92 LFDAKRLIGRDYHDKDVQGDIKRYPFKV--INKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVLRIINEPTAAAIAYGLEK---------KDTEKNILVFDLGGGTFDVSLLTIDNGVFEVVATSGDTHLGGEDFDQRL 261          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7D_DROME4.161e-1732.39Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP73_YEAST4.161e-1732.39Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP72_USTMA4.161e-1732.95Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_THEPA4.161e-1732.95Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_BRELC5.435e-1732.20Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HS7C3_DICDI5.435e-1733.33Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
GRP78_ECHMU5.435e-1733.1578 kDa glucose-regulated protein OS=Echinococcus m... [more]
HSP7A_DROME7.098e-1735.23Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP70_BLAEM7.098e-1732.95Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
GRP78_ECHGR7.098e-1733.1578 kDa glucose-regulated protein OS=Echinococcus g... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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