CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 56/176 (31.82%), Postives = 92/176 (52.27%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566
            +F+ KRLIGR   D  V A  K  PF V  V+   +P +        +  TPEE+ ++ L ++R  AE  L   + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA  + Y          +  +  E+  +IF+ G G  DV++     G+ ++K+ +G + +GGE+
Sbjct:   65 VFDAKRLIGRKFNDAEVQADMKHFPFKV--VEKSGKPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAGGIAYGL--------DKKADGERNVLIFDFGGGTFDVSLLTIEEGIFEVKSTAGDTQLGGEE 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 55/176 (31.25%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF++KRLIG    D  V    K  P+ V+  D   +P +        ++ TPEE+ A+ L +++ +A+  L + + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y             +  EK  V++++G G  DV++ +   GV ++ A +G   +GGED
Sbjct:  100 IFDIKRLIGLKYKDESVQRDIKHFPYKVKNKD--GKPVVVVETKGEKKTYTPEEISAMILTKMKDIAQDYLGKKVTHAVVTVPAYFNDAQRQATKDAGIIAGLNVLRIVNEPTAAAIAYGLDH---------TDDEKQIVVYDLGGGTFDVSLLSIESGVFEVLATAGDTHLGGED 264          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 58/182 (31.87%), Postives = 95/182 (52.20%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR   D  V    K +P+ +   D   +P+I   + +      +PEE+ A+ L +++  AE  L + I + V+T+P  F+  Q    + A  +AGL+V R++ EPTA A+ Y              G EK  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   96 IFDVKRLIGRKFQDKEVQRDMKLVPYKIINKD--GKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDK---------KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRI 266          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_VIBHB (Chaperone protein hscA homolog OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hscA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.601e-16
Identity = 60/175 (34.29%), Postives = 88/175 (50.29%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566
            I ++KRLIGR   D +     SLP+  +  D G+      ++  A     P EV A  L  L   AE  L   +  VV+T+P  F   Q    + A  +AGLHVLRL+ EPTA A+ Y           L SG E +  ++++G G  D+++   + GV ++ A  G SA+GG+D
Sbjct:   82 IISVKRLIGRSLKD-IQARYPSLPYQFKESDNGL-----PILQTAQGDKNPIEVSADILKSLGKRAEETLGGELAGVVITVPAYFDDAQRAGTKDAAKLAGLHVLRLLNEPTAAAIAY----------GLDSGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALGGDD 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_PASMU (Chaperone protein hscA homolog OS=Pasteurella multocida GN=hscA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.601e-16
Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566
            I ++KRLIGR   D V     SLP+  +  + G+      L+  +  + +P E+ A  L +L A+AE +L   +   V+T+P  F   Q    + A  +AG++VLRL+ EPTA A+ Y           L SG E +  ++++G G  D+++   + GV ++ A  G +A+GG+D
Sbjct:   82 IVSVKRLIGRSLAD-VQQRYPSLPYQFEASENGL-----PLIRTSKGTLSPVEISAEILKKLTALAEKRLAGELSGAVITVPAYFDDAQRQSTKDAAKLAGINVLRLLNEPTAAAIAY----------GLDSGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDTALGGDD 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.009e-16
Identity = 56/181 (30.94%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  +D  V +   L PF V     G +P I        +  + EE+ ++ L++++ +AE  L   ++N V+T+P   +  Q    + A  ++GL+V+R++ EPTA A+ Y       + +   S  EK  +IF++G G  DV++     G+ ++KA +G   +GGED    M
Sbjct:   70 VFDAKRLIGRRFSDASVQSDMKLWPFKV-IPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNVMRIINEPTAAAIAY------GLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 243          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.009e-16
Identity = 60/177 (33.90%), Postives = 96/177 (54.24%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDP-VVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTV-SATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP +    K  PF V  V  G +P I        +   PEE+ ++ LV+++  AE  L   I + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA AL Y       + +NL    E+  +IF++G G  DV++ +   G + ++++ +G   +GGED
Sbjct:   64 VFDAKRLIGRKYDDPKIAEDIKHWPFKV--VSDGGKPKIGVEYKGESKRFAPEEISSMVLVKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY------GLDKNL--KGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_VIBPA (Chaperone protein hscA homolog OS=Vibrio parahaemolyticus GN=hscA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.009e-16
Identity = 60/175 (34.29%), Postives = 88/175 (50.29%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566
            I ++KRLIGR   D +     SLP+  +  D G+      ++  A     P EV A  L  L   AE  L   +  VV+T+P  F   Q    + A  +AGLHVLRL+ EPTA A+ Y           L SG E +  ++++G G  D+++   + GV ++ A  G SA+GG+D
Sbjct:   82 IISVKRLIGRSLKD-IQSRYPSLPYRFKESDNGL-----PVLQTAQGDKNPIEVSADILKALGKRAEETLGGDLAGVVITVPAYFDDAQRAGTKDAAKLAGLHVLRLLNEPTAAAIAY----------GLDSGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALGGDD 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_RHORT (Chaperone protein dnaK OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dnaK PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.009e-16
Identity = 60/181 (33.15%), Postives = 90/181 (49.72%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRST-----TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F +KRLIGR  +DP V   K L P+ +   D G          +AW  T      P ++ A  L +++  AE  L  P+   V+T+P  F+  Q    + A  +AGL VLR++ EPTA AL Y         +N G+       +F++G G  DV+V     GV ++K+ +G   +GGED
Sbjct:   66 LFAIKRLIGRRYSDPTVEKDKGLVPYRIVKGDNG----------DAWVQTRDEKYAPSQLSAFILQKMKETAEAHLGEPVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGMD-----KKNTGT-----IAVFDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGED 226          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_RHILO (Chaperone protein dnaK OS=Rhizobium loti GN=dnaK PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.009e-16
Identity = 57/176 (32.39%), Postives = 87/176 (49.43%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF +KRLIGR   DPV    K L P+ +   D G      A V    +  +P ++ A+ L +++  AE  L   +   V+T+P  F+  Q    + A  +AGL VLR++ EPTA AL Y           L     K   ++++G G  D++V     GV ++K+ +G   +GGED
Sbjct:   66 IFAVKRLIGRRYDDPVTEKDKKLVPYKIVKGDNG-----DAWVEAGGKKQSPSQISAMILQKMKETAEAYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAY----------GLDKKDGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGED 226          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_TRIRU3.523e-1631.82Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
GRP78_YARLI3.523e-1631.2578 kDa glucose-regulated protein homolog OS=Yarrow... [more]
BIP3_MAIZE3.523e-1631.87Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
HSCA_VIBHB4.601e-1634.29Chaperone protein hscA homolog OS=Vibrio harveyi (... [more]
HSCA_PASMU4.601e-1632.00Chaperone protein hscA homolog OS=Pasteurella mult... [more]
HSP72_SOLLC6.009e-1630.94Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_DROSI6.009e-1633.90Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSCA_VIBPA6.009e-1634.29Chaperone protein hscA homolog OS=Vibrio parahaemo... [more]
DNAK_RHORT6.009e-1633.15Chaperone protein dnaK OS=Rhodospirillum rubrum (s... [more]
DNAK_RHILO6.009e-1632.39Chaperone protein dnaK OS=Rhizobium loti GN=dnaK P... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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