CX296750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_SALAI (Chaperone protein dnaK OS=Salinispora arenicola (strain CNS-205) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGS-EKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 TP+E+ A L++L+ AE+ L I + V+T+P F+ Q + A +AG +VLR++ EPTA AL Y L GS E+ ++F++G G DV++ A GV ++K+ SG + +GG+D Sbjct: 87 TPQEISARTLMKLKRDAESYLGEQITDAVITVPAYFNDGQRQATKEAGEIAGFNVLRIVNEPTAAALAY----------GLDKGSKEQTVLVFDLGGGTFDVSLLELAEGVIEVKSTSGDNLLGGDD 203
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_METBF (Chaperone protein dnaK OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=dnaK PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 195 PEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 P+E+ A+ L +L+ AE L I+ V+T+P F+ Q + A A+AGL VLR++ EPT+ +L Y + G +KI +++++G G DV++ GGV ++K+ SG + +GG+D Q + Sbjct: 89 PQEISAMILQKLKTDAEAYLGETIKQAVITVPAYFNDAQRQATKDAGAIAGLDVLRIINEPTSASLAYGL--------DKGDIEQKI-LVYDLGGGTFDVSILELGGGVFEVKSTSGDTRLGGDDFDQRI 209
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_MEGEL (Chaperone protein dnaK (Fragment) OS=Megasphaera elsdenii GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566 TP+E+ A+ L +L+ AE+ L + V+T+P F+ Q + A +AGL VLR++ EPTA AL Y L G + ++F++G G DV++ GV ++KA +G+ +GG+D Sbjct: 87 TPQEISAMILQKLKEDAESYLGEKVTQAVITVPAYFNDGQRQATKDAGKIAGLDVLRIVNEPTAAALAY----------GLDKGGDGKILVFDLGGGTFDVSILELGDGVFEVKATNGNTHLGGDD 202
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 +P+E+ A+ L +L+A AE L + V+T+P FS Q + A +AGL VLR++ EPTA AL Y L ++ +F++G G DV++ GV ++K+ SG + +GG+D Q + Sbjct: 87 SPQEISAMILSKLKADAEAYLGESVTQAVITVPAYFSDAQRQATKDAGKIAGLEVLRIINEPTAAALAY----------GLDKEGDQTIQVFDLGGGTFDVSILELGDGVFEVKSTSGNNRLGGDDFDQRI 207
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_DEHSC (Chaperone protein dnaK OS=Dehalococcoides sp. (strain CBDB1) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 53/187 (28.34%), Postives = 91/187 (48.66%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNN-------AWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 ++++KR +GR +P A + LP D +P+ NN + +P EV A+ L +L++ AE L + V+T+P F+ Q + A A+AGL VLR++ EPTA AL Y L ++ ++++G G D+++ G Q+K+ +G +GG+D Q + Sbjct: 66 VYSIKRFMGRKWGEP---AGRELPV---EADAKRKPYKVIQGNNNEVRVVMGDKDFSPPEVSAMILQKLKSDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGAIAGLKVLRIINEPTAAALAY----------GLDKKKDETIAVYDLGGGTFDISILELGEGTFQVKSTAGDTHLGGDDFDQKI 236
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_DEHSB (Chaperone protein dnaK OS=Dehalococcoides sp. (strain BAV1) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 53/187 (28.34%), Postives = 91/187 (48.66%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNN-------AWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 ++++KR +GR +P A + LP D +P+ NN + +P EV A+ L +L++ AE L + V+T+P F+ Q + A A+AGL VLR++ EPTA AL Y L ++ ++++G G D+++ G Q+K+ +G +GG+D Q + Sbjct: 66 VYSIKRFMGRKWGEP---AGRELPV---EADAKRKPYKVIQGNNNEVRVVMGDKDFSPPEVSAMILQKLKSDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGAIAGLKVLRIINEPTAAALAY----------GLDKKKDETIAVYDLGGGTFDISILELGEGTFQVKSTAGDTHLGGDDFDQKI 236
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_DEHE1 (Chaperone protein dnaK OS=Dehalococcoides ethenogenes (strain 195) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 53/187 (28.34%), Postives = 91/187 (48.66%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNN-------AWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 ++++KR +GR +P A + LP D +P+ NN + +P EV A+ L +L++ AE L + V+T+P F+ Q + A A+AGL VLR++ EPTA AL Y L ++ ++++G G D+++ G Q+K+ +G +GG+D Q + Sbjct: 66 VYSIKRFMGRKWGEP---AGRELPV---EADAKRKPYKVIQGNNNEVRVVMGDKDFSPPEVSAMILQKLKSDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGAIAGLKVLRIINEPTAAALAY----------GLDKKKDETIAVYDLGGGTFDISILELGEGTFQVKSTAGDTHLGGDDFDQKI 236
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPD (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 55/180 (30.56%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 I+++KR +GR D V + K P+ + V A V ++ +P+E+ A+ L +++ AE L + V+T+P F+ Q + A +AGL V R++ EPTA AL Y S SEK+AV F++G G D+++ GV ++K+ G +GG+D Q + Sbjct: 66 IYSIKRFVGR-KFDEVPNEKKLAPYDI------VNEGGEARVKINDKAYSPQEISAMILQKMKQTAEDFLGEKVSEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKQS--------SEKVAV-FDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQKI 229
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_BREBN (Chaperone protein dnaK OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 42/126 (33.33%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 TPE++ A+ L +L+A AE L + + V+T+P F+ Q + A +AGL VLR++ EPTA AL Y + ++ ++F++G G DV++ + G ++KA SG + +GG+D Sbjct: 86 TPEQISAMILQKLKADAEAYLGQSVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIVNEPTAAALAY----------GMEKTEDQTVLVFDLGGGTFDVSILELSDGFFEVKATSGDNKLGGDD 201
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_ACICJ (Chaperone protein dnaK OS=Acidiphilium cryptum (strain JF-5) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 51/181 (28.18%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 ++ +KRLIGR DP V K L + + D G A V + + P ++ + L +++ AE L + V+T+P F+ Q + A +AGL VLR++ EPTA AL Y + ++++G G D+++ GV ++K+ +G +GGED Q + Sbjct: 66 LYAVKRLIGRRYDDPTVEKDKGLVSYNIVRGDNG-----DAWVESRGQRYAPSQISSFVLTKMKETAEAYLGEAVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAY----------GMDKKQGGTIAVYDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQRV 231 The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bpback to top |