CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  +DP V +   L PF V     G +P I        +    EE+ ++ L +++ +AE  L   I+N V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y       + +   S  EK  +IF++G G  DV++     G+ ++KA +G   +GGED    M
Sbjct:   70 VFDAKRLIGRRFSDPSVQSDIKLWPFKV-IPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAY------GLDKKASSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 243          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 58/184 (31.52%), Postives = 104/184 (56.52%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSG---SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  D + V    K+ PF  + +D+   P +        ++ +P+E+ ++ L +++ +AE ++ + +   V+T+P  F+  Q    + A +++GL+VLR++ EPTA A+ Y           LG+G    E+  +IF++G G  DV++   AGGV  +K+ SG+  +GG+D   NM
Sbjct:   69 VFDAKRLIGRRFDDESVQKDRKTWPF--KLIDVEGNPVVEVQYLGETKTFSPQEISSMVLTKMKEIAEAKIGQKVEKAVITVPAYFNDAQRQATKDAGSISGLNVLRIINEPTAAAIAY----------GLGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNM 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 59/181 (32.60%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  D + V    K+ PF V  +D    P I        ++ +P+E+ ++ L +++ +AE ++ + +   V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y             S  E+  +IF++G G  DV++   AGGV  +K+ SG+  +GG+D   N+
Sbjct:   69 VFDAKRLIGRRFDEESVQSDMKTWPFKV--IDSNGAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGVGAG-------NSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNL 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 61/184 (33.15%), Postives = 103/184 (55.98%), Query Frame = 3
Query:   45 IFNMKRLIGRV-DTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSG---SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  D + V    KS PF V  V+   +P I     +  ++ +P+E+ ++ L +++ +AE ++ + +   V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y           LG+G    E+  +IF++G G  DV++    GGV  +KA +G   +GG+D   N+
Sbjct:   69 VFDAKRLIGRAFDDESVQKDIKSWPFKV--VESNGQPLIEVEYLDETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAY----------GLGAGKSEKERHVLIFDLGGGTFDVSLLNITGGVFTVKATAGDTHLGGQDFDTNL 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 57/180 (31.67%), Postives = 98/180 (54.44%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  + P V +S  L +  + + +G +P I        +    EE+ ++ L++++ +AE  L   I+N V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y       + +   S  EK  +IF++G G  DV++     G+ ++KA +G   +GGED    M
Sbjct:   69 VFDAKRLIGRRFSSPAVQSSMKL-WPSRHLGLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAY------GLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 241          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKS-LPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D VV +  +  PF V  ++   RP +        +S  PEEV ++ L +++ +AE  L + + N V+T+P  F+  Q    + A  ++GL+VLR++ EPTA A+ Y              GSE+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRRFDDHVVQSDMNDWPFNV--INDNTRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVNNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKV--------GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 59/176 (33.52%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV +  K  PF V  V+   RP +        +S  PEE+ ++ L +++ +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G+E+  +IF++G G  DV++     G+ ++K+ +G   +GGED
Sbjct:   67 VFDAKRLIGRRFDDSVVQSDMKHWPFTV--VNDAGRPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQGTKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--------GAERNLLIFDLGGGTFDVSILTIENGIFEVKSTAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 57/176 (32.39%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V    K  PF  + +D+  +P I        ++ TPE++ ++ L +++  AE+ L   + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G E+  +IF++G G  DV++ +   G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRNFNDPEVQGDMKHFPF--KLIDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDK---------KGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGED 229          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 61/176 (34.66%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR  +DPV+ +  K  PF V   + G +P +        ++ +PEEV ++ L++++  AE  L + I N V+T+P  F+  Q    + A A+A L+V R++ EPTA A+ Y             S  E+  +IF++G G  DV++     GV ++KA +G   +GGED
Sbjct:   65 IFDAKRLIGRKFSDPVIQSDMKHWPFKVIAKE-GDKPHLQVEFKGEVKTFSPEEVSSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGAIAKLNVQRIINEPTAAAIAYGLEKK--------SQGERNILIFDLGGGTFDVSLLTIEDGVFEVKATAGDTHLGGED 231          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 60/181 (33.15%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR  D   V   +K  P+ V   D   +P +   VN   ++ TPEEV A+ L +++ +AE  L + + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y             +G E+  +++++G G  DV++ +   GV ++ A +G   +GGED  Q +
Sbjct:  112 IFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKD--GKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDK---------TGDERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRV 281          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PETHY1.294e-1833.15Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP75_ZYGRC1.294e-1831.52Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]
HSP75_KLUMA1.294e-1832.60Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
HSP75_CANAL1.294e-1833.15Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]
HSP70_MAIZE1.294e-1831.67Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP7C_ORYLA1.689e-1832.60Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_CHICK1.689e-1833.52Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP72_YEAST1.689e-1832.39Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HS7C2_DICDI1.689e-1834.66Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
GRP78_ASPNG1.689e-1833.1578 kDa glucose-regulated protein homolog OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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