CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 60/181 (33.15%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR  D   V   +K  P+ V   D   +P +   VN   ++ TPEEV A+ L +++ +AE  L + + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y             +G E+  +++++G G  DV++ +   GV ++ A +G   +GGED  Q +
Sbjct:  112 IFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKD--GKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDK---------TGDERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRV 281          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 60/181 (33.15%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR  D   V   +K  P+ V   D   +P +   VN   ++ TPEEV A+ L +++ +AE  L + + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y             +G E+  +++++G G  DV++ +   GV ++ A +G   +GGED  Q +
Sbjct:  112 IFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKD--GKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDK---------TGDERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRV 281          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP77_HUMAN (Putative heat shock 70 kDa protein 7 OS=Homo sapiens GN=HSPA7 PE=5 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.882e-18
Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D  V +  K  PF  Q V  G +P +        ++  PEE+ ++ L +++  AE  L +P+++ V+T+P  FS  Q    + A A+AGL VL ++ E TA A+ Y         +  G+G   + +IF++G G  DV+V +   GV ++KA +G   +GGED
Sbjct:   69 VFDAKRLIGRKFADTTVQSDMKHWPF--QVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPTYFSNSQRQATKDAGAIAGLKVLPIINEATAAAIAYGL-------DRRGAGKRNV-LIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   +  V    K  PF +  VD   +P +   V +  +  TPEEV A+ L +++ +AE+ L   ++N V+T+P  F+  Q    + A ++AGL+V+R++ EPTA A+ Y                E+  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   95 IFDAKRLIGRFYNEKTVQQDIKHWPFKI--VDKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDK---------KDGERNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRV 264          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   D  V A  K  PF V  +D   +P +   V    +  TPEEV A+ LV+++ +AE+ L + +++ V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y                E+  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   98 IFDAKRLIGRDYNDKTVQADIKHWPFKV--LDKSNKPSVEVKVGADNKQFTPEEVSAMVLVKMKEIAESYLGKEVKHAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDK---------KDGERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRV 267          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 60/176 (34.09%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V    K  PF V  V+ G +P I        +  TPEE+ ++ L +++  AE+ +   + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y         +  G G + I +IF++G G  DV++ +   G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFDDPEVQNDIKHFPFKV--VEKGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLD-----KKEQGKGEQNI-LIFDLGGGTFDVSLLSIDEGIFEVKATAGDTHLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV +  K  PF V T     +P IA       ++ TPEE+ ++ L++++  AE  L + ++  V+T+P  F+  Q    + A  +AGL VLR++ EPT  A+ Y         +    G E+  +IF++G G  DV++    GG+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDD-KPMIAVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTR-AIAYGL-------DKGDDGKERNVLIFDLGGGTFDVSLLTIDGGIFEVKATNGDTHLGGED 233          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_TRYBB (Heat shock cognate HSP70 protein OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.916e-18
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   33 SGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDL 569
            S   IF+ KRLIGR  +D VV +  K  PF V+  + G        +        PE++ A  L  L++ AE+ L + +   V+T+P  F+  Q    + A  +AGL VLR++ EPTA A+ Y         +    G E+  ++F+ G G  DV++ + +GGV ++KA +G   +GGED+
Sbjct:   63 SNGVIFDAKRLIGRKFSDSVVQSDMKHWPFKVEEGEKGGAVMRVEHLGEGML-LQPEQISARVLAYLKSCAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYGL-------DKADEGKERNVLVFDFGGGTFDVSIISVSGGVFEVKATNGDTHLGGEDV 235          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.916e-18
Identity = 61/182 (33.52%), Postives = 102/182 (56.04%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTV-SATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP + A  K  PF V  V+ G +P I        ++  PEE+ ++ L +++  AE  L + ++N V+T+P  F+  Q    + A A+AGL+V+R++ EPTA AL Y       + +NL    E+  +IF++G G  DV++ +   G + ++++ +G   +GGED    M
Sbjct:   65 VFDAKRLIGRKFDDPKIQADMKHWPFTV--VNDGGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAY------GLDKNL--KGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRM 236          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.916e-18
Identity = 57/181 (31.49%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   DP V +  K  PF V  V+ G +P +        ++  PEE+ ++ L +++ +AE  L + +   V+T+P  F+  Q    + A  + GL+V+R++ EPTA A+ Y      +         EK  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   68 IFDAKRLIGRKYDDPTVQSDMKHWPFRV--VNEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAYFNDSQRQATKDAGTITGLNVMRIINEPTAAAIAYGLDKKGT------RAGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPKA1.689e-1833.1578 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW1.689e-1833.1578 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP77_HUMAN2.882e-1834.09Putative heat shock 70 kDa protein 7 OS=Homo sapie... [more]
HSP7D_CAEEL3.764e-1832.60Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
HSP7C_CAEBR3.764e-1833.70Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP71_PICAN3.764e-1834.09Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP70_LEIDO3.764e-1834.09Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP7C_TRYBB4.916e-1833.15Heat shock cognate HSP70 protein OS=Trypanosoma br... [more]
HSP74_ANOAL4.916e-1833.52Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_CHICK4.916e-1831.49Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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