CX296765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGR----HARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 457 +A +AP+ VF+DEIDA+ + ++ + + T L+ QLDG R V I ATNR + LD +RPGRIDR++ LPD K + +IF +H++ LAEDVN EL+ SGADI+ + E+G+M++R+ K+ +D Sbjct: 272 VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVK---------VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 417
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 20 APAFVFVDEIDAIAGR----HARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 490 +P+ VF+DEIDA+ + H+ + + T L+ QLDG R V I ATNR + LD +RPGRIDR++ LPD K R +IF +H++ L+EDVN EE V FSGADI+ + E+G++++R+ K+ D +K + + Sbjct: 281 SPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVK---------VILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFK 432
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 69/222 (31.08%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIA----GRHAR-KDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQ--LAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPG 652 A++ +P+ +F+DEIDA+A GR+ + R T L+ ++DG AVI + ATNR D LD RPGR DR + + PD R I VH + K+ L +DV+ ++ T GF+GAD+ NLVNE+ +++ R +++ D + +++ + G+ +K + +K ++A HE GH V+ A + LLPG Sbjct: 434 AKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDG---------FDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSI---AGI-------EKKHAKLKGNEKAVVARHEVGHAVVG--------TAVANLLPG 628
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHAR--KDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAH 604 A+ NAP +F+DE+D++ G+ P R T L+A++DG K GV I I ATN P+ LD +RPGR D ++ + PD K R +I + + + V+ E + TVGFSGA++ NLVN++ + + G + +++ DK +L E++ E + + K + A HE+GH ++A+ Sbjct: 369 AKANAPCVIFIDELDSVGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGV---------IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDK--------ILMGPERRSVE--IDNKNKTITAYHESGHAIIAY 550
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 62/204 (30.39%), Postives = 107/204 (52.45%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHAR-----KDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598 AR AP V++DEIDA+ + + + T L+ ++DG + VI + +TNR D LD +RPGR+DR ++I LP ++R +IF+ H +L + F + L T GFSGADI N+ NE+ + + R+GH+ + + +++ +L G K + +S E+++++A HE+GH ++ Sbjct: 397 ARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDG---------MGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVER-VLAGTA---------KKSKILSKEEQKVVAFHESGHALV 581
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 58/161 (36.02%), Postives = 90/161 (55.90%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 AR + P +F+DEIDAI GR + D + T L+ QLDG D + V I ATNRPD LD +RPGR+DR++ I LP+ + R+ I +H+AG ++++E +V GF+GAD+RN+ E+G+ ++R + +D + + K Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG------FDNLG---KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRK 379
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 57/161 (35.40%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 AR + P +F+DEIDAI GR + D + T L+ QLDG D++ V I ATNRPD LD +RPGR+DR++ I LP+ + R++I +H++G ++++E +V GF+GAD+RN+ E+G+ ++R + +D + + K Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG------FDQLG---KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRK 379
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 A+ + P +F+DE+DAI GR + D + T L+ Q+DG + G +I I ATNRPD LD +RPGR+DR++ I LP+ R++IF +H+A + + +FE V + GF+GADIRN E+G ++R I D++ + K Sbjct: 270 AKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGF-DNLGQTKI--------IMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRK 421
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 53/168 (31.55%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLL 508 A +N+PA +F+DEID+IA + + + R L+ +DG K R+ V + + ATNRP+ +D R GR DR + +G+PD R++I +H+ +LA+DV+ E++ T G+ G+D+ +L +E+ + +R+ I + D +D ++L+ +GV + Sbjct: 313 AEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNV---------VVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE--DEIDAEVLDSLGVTM 469 HSP 2 Score: 81.2629 bits (199), Expect = 5.370e-15 Identity = 48/143 (33.57%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIA---GRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVR 427 AR AP VF+DE+D+IA G A L+ ++DG ++ ++ V I ATNRPD++D +RPGR+D+ +Y+ LPD + R I +AEDV+ + T GFSGAD+ +V + ++++ Sbjct: 586 ARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDG---------VNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIK 719
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 54/168 (32.14%), Postives = 94/168 (55.95%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLL 508 A +N+PA +F+DEID+IA + + + R L+ +DG K R+ V + + ATNRP+ +D R GR DR + IG+PD R++I +H+ +L EDV+ E + T G+ G+D+ +L +E+ + +R+ I + D +D ++L+ +GV + Sbjct: 318 AEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNV---------VVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE--DTIDAEVLDSLGVTM 474 HSP 2 Score: 80.4925 bits (197), Expect = 9.159e-15 Identity = 55/179 (30.73%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSV 544 AR AP VF+DE+D+IA + ++ QL T +D ++ ++ V I ATNRP++LD VRPGR+D +Y+ LPD R I +A DV+ E + +T GFSGAD+ G ++ R I++ ++ ++ E G + E++++ E V Sbjct: 592 ARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQL-----LTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADL-------GFVTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEEEGEDPV 758 The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bpback to top |