CX296765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20 Identity = 57/165 (34.55%), Postives = 95/165 (57.58%), Query Frame = 2 Query: 14 RNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLL 508 +N+PA +F+DEIDAIA +++ + +++QL T +D + R V+ I ATNRP+ +D R GR DR + IG+PDA R++I +H+ +L EDV+ E++ GF GAD+ +L +E+ I +R+ I +D D +D ++L + V + Sbjct: 300 KNSPAILFIDEIDAIA---PKREKAHGEVEKRIVSQL-----LTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED--DTIDAEVLNSLAVTM 454 HSP 2 Score: 83.1889 bits (204), Expect = 1.413e-15 Identity = 55/171 (32.16%), Postives = 88/171 (51.46%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEE 520 AR AP +F DE+D+IA + +I Q+ T +D ++ ++ V I ATNRPD +D +RPGR+D+ +YI LPD R+QIF L+ D++ L TVGFSGAD+ + + +++R+ +++I ++Q G L E+E Sbjct: 571 ARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQV-----LTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES----IEREIRQEKERQDRSARGEELMEDE 732
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20 Identity = 64/203 (31.53%), Postives = 106/203 (52.22%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598 AR+ AP+ +F+DEIDAI R + R +T L+ ++DG GV + + TNRPD LD +RPGR DR++ I PD K R QIF ++ +L + ++ + L T GF+GADI N+ NE+ +++ R + + +D+ ++ G+ +K + +S ++R +A HE+GH V+ Sbjct: 410 ARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGV---------VVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDR-VIGGL---------EKKNRVISKLERRTVAYHESGHAVV 593
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20 Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 601 AR APA +F+DE+DAI G+ KD + T L+ +LDG + +G+ I I ATN P+ LD RPGR D+ + + LPD + R I H LA++V+ + T G SGA++ NLVN++ + + +K + DK L+ E ++LT+ ++ A HEAGH ++A Sbjct: 369 ARSRAPAIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGI---------IIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTD------------AARKATAFHEAGHAIMA 548
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20 Identity = 68/204 (33.33%), Postives = 107/204 (52.45%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIA-----GRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFE---ELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIV 595 AR NAP+ VF+DEIDAI G + + R T ++ ++DG T D V+ + TNRPD LD +RPGR DR + I P+ + R IF VH +LA ++ F+ L T GFSGADI N+ NE+ +++ R ++ +++ ++ G+ ++ + +S E+K+++A HEAGH V Sbjct: 436 ARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGF---TPADH------VVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEI-FDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIER-VIGGV---------ERKSKLLSPEEKKVVAYHEAGHAV 619
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20 Identity = 57/162 (35.19%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRH----ARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 +AR +F DE+DAI G A D + T LI QLDG R + + ATNRPD LD +RPGR+DR++ GLPD + R IF +H+ A D+ FE L +GADIR++ E+G+ ++R + ++D ++ +DK Sbjct: 258 MARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIK---------VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDK 410
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20 Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 20 APAFVFVDEIDAIAGRH--ARKDPRR--RATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 490 +P+ VF+DEIDA+ + A R + T L+ QLDG R V I ATNR + LD +RPGRIDR++ LPD K R +IF +H++ LAEDVN EE V FSGADI+ + E+G++++R+ K+ D +K + + Sbjct: 281 SPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVK---------VILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFK 432
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20 Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 AR + P +F+DEIDAI GR + D + T L+ Q+DG V I ATNRPD LD +RPGR+DR+++I LP+ + R+ I +H+ ++++E +V + GF+GAD+ N+ E+G+ ++R H + Q+D + + K Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG---------FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRK 373
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20 Identity = 55/170 (32.35%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTE 514 A +NAPA +F+DE+DAIA + + R L+ +DG K+R V I + ATNRP+ +D R GR DR + IG+PD+ R++I +H+ +L++DV+ E++ T G GAD+ L +E+ + ++RK I +D + +D +++ + V + + Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV---------IVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETIDAEVMNSLAVTMDD 451 HSP 2 Score: 83.9593 bits (206), Expect = 8.284e-16 Identity = 49/141 (34.75%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 430 AR+ AP +F DE+D+IA + +I Q+ T +D +S ++ V I ATNRPD +D +RPGR+D+ +YI LPD K R+ I + +A+DV+ + L T GFSGAD+ + + +++R+ Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQI-----LTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20 Identity = 55/170 (32.35%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTE 514 A +NAPA +F+DE+DAIA + + R L+ +DG K+R V I + ATNRP+ +D R GR DR + IG+PD+ R++I +H+ +L++DV+ E++ T G GAD+ L +E+ + ++RK I +D + +D +++ + V + + Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV---------IVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETIDAEVMNSLAVTMDD 451 HSP 2 Score: 83.9593 bits (206), Expect = 8.284e-16 Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 430 AR+ AP +F DE+D+IA + +I Q+ T +D +S+++ V I ATNRPD +D +RPGR+D+ +YI LPD K R+ I + +A+DV+ + L T GFSGAD+ + + +++R+ Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQI-----LTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20 Identity = 57/162 (35.19%), Postives = 87/162 (53.70%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 +A+ AP+ +F+DEIDAIA + D + T L+A++DG R V I ATNRPD LD +RPGR DR + + PD K R++I +H+ LAEDVN EE+ T G GA+++ + E+G+ ++R+ + D ++K Sbjct: 258 LAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDG---------FDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEK 410 The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bpback to top |