CX296765

Overview
NameCX296765
Unique NameCX296765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28
Identity = 77/230 (33.48%), Postives = 120/230 (52.17%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL--LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A+ NAP  VF+DEIDA+  +        +  R  T   L+ ++DG +  TGV         I I ATNR D LD   +RPGR DR++ + +PD + R+ I +VH+  K++   V+ E +  RT GFSGAD+ NL+NE+ I++ R+  S +   +I   +D+ +  LEG  +             +  + KRL+A HE GH ++  L    D      L+P G+   ++ F
Sbjct:  261 AKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGV---------IVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPL-------------IDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWF 468          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28
Identity = 76/228 (33.33%), Postives = 119/228 (52.19%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A+ N+P  VF+DEIDA+  +        +  R  T   L+ ++DG +  TG+         I I ATNR D LD   +RPGR DR++ + +PD K R++I +VH+  K+L   ++ E +  RT GFSGAD+ NL+NE+ I++ R+   +I   +I   +D+ +    G  L           V  + KRL+A HE GH ++  L    D      L+P G+   ++ F
Sbjct:  261 AKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGI---------IIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGKAL-----------VDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAKGLTWF 468          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28
Identity = 76/228 (33.33%), Postives = 118/228 (51.75%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A+ NAP  VF+DEIDA+  +        +  R  T   L+ ++DG +  TGV         I I ATNR D LD   +RPGR DR++ + +PD K R+ I +VH+  K++   V+ E +  RT GFSGAD+ NL+NE+ I++ R+  + +   +I   +D+ +    G  L           +  + KRL+A HE GH ++  L    D      L+P G+   ++ F
Sbjct:  261 AKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGV---------IVIAATNRADILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSEIDTSIDRVVAGMEGTPL-----------IDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWF 468          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28
Identity = 68/205 (33.17%), Postives = 118/205 (57.56%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHL 607
            A++ AP+ +F+DEIDAI     AG     +  R  T   L+A++DG               VI + ATNRP+ LD   +RPGR DR++ +  PD   RV+I  VH  G +LA DVN +E+   T G +GAD+ N++NE+ +++ R    +++QQ + + +++      G+   E++ ++    +S ++K+++A HE+GH V++ +
Sbjct:  258 AKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENA--------PVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVER------GIAGLEKKSRR----ISPKEKKIVAYHESGHAVISEM 444          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28
Identity = 68/205 (33.17%), Postives = 118/205 (57.56%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHL 607
            A++ AP+ +F+DEIDAI     AG     +  R  T   L+A++DG               VI + ATNRP+ LD   +RPGR DR++ +  PD   RV+I  VH  G +LA DVN +E+   T G +GAD+ N++NE+ +++ R    +++QQ + + +++      G+   E++ ++    +S ++K+++A HE+GH V++ +
Sbjct:  258 AKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENA--------PVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVER------GIAGLEKKSRR----ISPKEKKIVAYHESGHAVISEM 444          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.435e-28
Identity = 68/206 (33.01%), Postives = 119/206 (57.77%), Query Frame = 2
Query:    5 IARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHL 607
            IA++ AP+ +F+DEIDAI     AG     +  R  T   L+A++DG               VI + ATNRP+ LD   +RPGR DR++ +  PD K RV+I  VH    +LA DV+ +E+   T G +GAD+ N++NE+ +++ R    +++QQ + + +++      G+   E++ ++    +S ++K+++A HE+GH V++ +
Sbjct:  263 IAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENA--------PVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVER------GIAGLEKKSRR----ISPKEKKIVAYHESGHAVISEM 450          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27
Identity = 73/222 (32.88%), Postives = 115/222 (51.80%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGK 658
            A++NAP  +F+DEIDA+     AG     D R + T   L+ ++DG          S  + +I I ATNR D LD   +RPGR DR++ +  PD   R  +  VH+  K L E VN + +  RT GFSGAD+ NL+NE+ +++ R+   KI  +DI +  D+ +              K  + +S +++ ++A HE GH V+  +    D      ++P G+
Sbjct:  249 AKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQLLVEMDG---------FSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVI----------AGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ 450          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27
Identity = 67/201 (33.33%), Postives = 112/201 (55.72%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598
            AR+ APA +F+DE+DA+           +  R  T   ++ ++DG  E  G+         + + ATNR D LD   +RPGR DR + +GLPD K+R +I  +HS GK+L++++ F+++  RT G+SGA + N++NE+ ++SVR+    I    I + +D+ +              K  + +S E+ + +A HEAGH V+
Sbjct:  300 ARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGI---------LIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVM----------AGPAKKSRVISQEELKAVAYHEAGHAVV 481          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27
Identity = 71/201 (35.32%), Postives = 113/201 (56.22%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHA----RKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598
            A++ APA +F+DEIDA+  +        +  R  T   L+ ++DG +   G+         I I ATNR D LD   +RPGR DR++ +G PD K R  I  VH+  K LAEDV+ + +  +T GF GAD+ N++NE+ +++ R+  S I   DI D  + +++ G           K +++VS +++ L+A HEAGH ++
Sbjct:  275 AKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGI---------IVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDI-DEAEDRVIAG---------PSKKDKTVSQKERELVAYHEAGHTIV 456          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27
Identity = 71/201 (35.32%), Postives = 113/201 (56.22%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHA----RKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598
            A++ APA +F+DEIDA+  +        +  R  T   L+ ++DG +   G+         I I ATNR D LD   +RPGR DR++ +G PD K R  I  VH+  K LAEDV+ + +  +T GF GAD+ N++NE+ +++ R+  S I   DI D  + +++ G           K +++VS +++ L+A HEAGH ++
Sbjct:  275 AKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGI---------IVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDI-DEAEDRVIAG---------PSKKDKTVSQKERELVAYHEAGHTIV 456          
The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
FTSH_PORPU2.483e-2833.48Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH_GUITH2.483e-2833.33Cell division protease ftsH homolog OS=Guillardia ... [more]
FSTH_PORYE2.483e-2833.33Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_HELPY4.235e-2833.17Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELPJ4.235e-2833.17Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELFE9.435e-2833.01Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_BACSU1.232e-2732.88Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH_MYCPU2.102e-2733.33Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_STRR63.585e-2735.32Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN3.585e-2735.32Cell division protease ftsH homolog OS=Streptococc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05802E10SK FerrChloL1 Citrus clementina cDNA clone C05802E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bp
TTCCATTGCAAGGAGAAACGCACCTGCTTTTGTATTTGTGGATGAAATTG
ATGCTATTGCTGGAAGGCATGCCAGAAAGGATCCACGAAGAAGGGCAACA
TTTGAGGCTCTAATTGCACAACTTGACGGGGACAAGGAAAGAACTGGTGT
TGATCGGATTTCACTTAGACAAGCTGTCATATTCATCTGCGCTACCAATA
GGCCAGATGAATTGGACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGC
CGTTTATACATTGGTTTGCCTGATGCAAAGCAACGAGTGCAAATATTTGA
TGTGCACAGTGCAGGAAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGC
TTGTCTTCCGTACAGTTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTG
AATGAATCAGGAATAATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCA
ACAAGACATTGTTGATGTGCTAGATAAACAATTGCTTGAGGGTATGGGTG
TACTTCTTACAGAAGAAGAGCAACAGAAATGTGAACAAAGTGTTTCTTTT
GAAAAAAAGAGGCTCTTGGCTGTACATGAAGCTGGGCACATAGTATTAGC
TCACCTTTTTCCTCGATTTGATTGGCATGCATTTTCTCAGCTCCTACCTG
GTGGCAAGGAAAACTGCATATCTGTGTTCTATCC
back to top