CX296765

Overview
NameCX296765
Unique NameCX296765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27
Identity = 78/231 (33.77%), Postives = 116/231 (50.22%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A++NAP  +F+DEIDA+     AG     D R + T   ++ ++DG     GV         I I ATNRPD LD    RPGR DR++ +GLPD K R QI  VH     +A+DV+   L   T G+SGAD+ NLVNE+ + + R     +   +     DK  +  E   +++T+++            K   A HEAGH ++ +L P  D      ++P G+   ++ F
Sbjct:  239 AKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFSGNDGV---------IVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQ------------KESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFF 447          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.043e-26
Identity = 68/201 (33.83%), Postives = 110/201 (54.73%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRA----TFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598
            A++ AP  +F+DEID++  +  R +    +    T   L+A++DG   RTGV         + + ATNR D LD   +RPGR DR + I LPD K+R  I  VH+  K L+  ++  ++  RT GFSGA + N++NE+ +++VR   + I   DI + +D+ +              K  + +S E ++L+A HEAGH ++
Sbjct:  319 AKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGV---------VVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVI----------AGPAKKSRVISDEDRKLVAYHEAGHALV 500          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 68/201 (33.83%), Postives = 109/201 (54.23%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRA----TFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598
            A++ AP  +F+DEID++  +  R +    +    T   L+A++DG   RTGV         + + ATNR D LD   +RPGR DR + I LPD K+R  I  VH+  K L+  ++  ++  RT GFSGA + N++NE+ +++VR   + I   DI + +D+ +              K  + VS   ++L+A HEAGH ++
Sbjct:  316 AKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGV---------VVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVI----------AGPAKKSRVVSDADRKLVAYHEAGHALV 497          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 66/197 (33.50%), Postives = 110/197 (55.84%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAIAGRHAR---KDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGH 589
            AR  AP  +F+DE+DAI          +  R  T   L+ ++DG    TG+         I + ATNRPD LD   +RPGR DR++ +  PD K R  I  +H+   +LA +V+ + +   T G+SGAD+ N+VNE+ +++VR G +++ + D+ + ++K ++ G+         QK  + +  E++R++A HE GH
Sbjct:  229 AREKAPGIIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGL---------ILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMI-GL---------QKKSRVIREEERRIIAYHETGH 406          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A++ AP  +F+DEIDA+     AG     D R + T   ++ ++DG +   G+         I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK ++  E   +++TE +            K   A HEAGH ++  L P  D      ++P G+   ++ F
Sbjct:  240 AKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFEGNEGI---------IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ------------KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFF 448          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A++ AP  +F+DEIDA+     AG     D R + T   ++ ++DG +   G+         I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK ++  E   +++TE +            K   A HEAGH ++  L P  D      ++P G+   ++ F
Sbjct:  240 AKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFEGNEGI---------IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ------------KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFF 448          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A++ AP  +F+DEIDA+     AG     D R + T   ++ ++DG +   G+         I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK ++  E   +++TE +            K   A HEAGH ++  L P  D      ++P G+   ++ F
Sbjct:  240 AKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFEGNEGI---------IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ------------KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFF 448          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A++ AP  +F+DEIDA+     AG     D R + T   ++ ++DG +   G+         I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK ++  E   +++TE +            K   A HEAGH ++  L P  D      ++P G+   ++ F
Sbjct:  240 AKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFEGNEGI---------IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ------------KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFF 448          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679
            A++ AP  +F+DEIDA+     AG     D R + T   ++ ++DG +   G+         I I ATNRPD LD   +RPGR DR++ +GLPD + R QI  VH     LA D++   +   T GFSGAD+ NLVNE+ + + R     +   +     DK ++  E   +++TE +            K   A HEAGH ++  L P  D      ++P G+   ++ F
Sbjct:  240 AKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFEGNEGI---------IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ------------KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFF 448          
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.177e-26
Identity = 70/207 (33.82%), Postives = 112/207 (54.11%), Query Frame = 2
Query:    8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFP 613
            A++N+P  +FVDEIDA+     AG     D R + T   L+ ++DG  +R GV         I I ATNRPD LD   +RPGR DR++ +  PD   R  +  VHS GK +A D + + L  RTVG +GAD+ N++NE+ +++ R+  + I    + + +D+ +             ++  + +S ++K++ A HE GH + A   P
Sbjct:  251 AKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQ-TLNQLLVEMDGFGDRAGV---------ILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVI----------GGPRRKGRIISEQEKKITAYHEGGHTLAAWAMP 437          
The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
FTSH1_HAEIN7.987e-2733.77Cell division protease ftsH homolog 1 OS=Haemophil... [more]
FTSH_MYCGE1.043e-2633.83Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCPN1.362e-2633.83Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_TREPA1.779e-2633.50Cell division protease ftsH homolog OS=Treponema p... [more]
FTSH_SHIFL3.964e-2632.90Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_SALTY3.964e-2632.90Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI3.964e-2632.90Cell division protease ftsH OS=Salmonella typhi GN... [more]
FTSH_ECOLI3.964e-2632.90Cell division protease ftsH OS=Escherichia coli (s... [more]
FTSH_ECO573.964e-2632.90Cell division protease ftsH OS=Escherichia coli O1... [more]
FTSH_MYCTU5.177e-2633.82Cell division protease ftsH homolog OS=Mycobacteri... [more]

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Properties
Property NameValue
Genbank descriptionC05802E10SK FerrChloL1 Citrus clementina cDNA clone C05802E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bp
TTCCATTGCAAGGAGAAACGCACCTGCTTTTGTATTTGTGGATGAAATTG
ATGCTATTGCTGGAAGGCATGCCAGAAAGGATCCACGAAGAAGGGCAACA
TTTGAGGCTCTAATTGCACAACTTGACGGGGACAAGGAAAGAACTGGTGT
TGATCGGATTTCACTTAGACAAGCTGTCATATTCATCTGCGCTACCAATA
GGCCAGATGAATTGGACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGC
CGTTTATACATTGGTTTGCCTGATGCAAAGCAACGAGTGCAAATATTTGA
TGTGCACAGTGCAGGAAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGC
TTGTCTTCCGTACAGTTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTG
AATGAATCAGGAATAATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCA
ACAAGACATTGTTGATGTGCTAGATAAACAATTGCTTGAGGGTATGGGTG
TACTTCTTACAGAAGAAGAGCAACAGAAATGTGAACAAAGTGTTTCTTTT
GAAAAAAAGAGGCTCTTGGCTGTACATGAAGCTGGGCACATAGTATTAGC
TCACCTTTTTCCTCGATTTGATTGGCATGCATTTTCTCAGCTCCTACCTG
GTGGCAAGGAAAACTGCATATCTGTGTTCTATCC
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