CX296765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.410e-23 Identity = 66/186 (35.48%), Postives = 103/186 (55.38%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSF 550 +A+ +P+ +F+DEIDA+A + + D + T L+A+LDG + R V + ATNRPD LD +RPGR DR + + LP+ R +I +H++G LAE+V+ E L T G SGAD++ + E+G+ ++R ++ D +D +DK MGV +EE+ K E V F Sbjct: 239 LAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVG---------IVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKI----MGV--EKEEEYKQETGVMF 409
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.410e-23 Identity = 66/199 (33.17%), Postives = 103/199 (51.76%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 601 A++ +P +F+DEIDAI G KD + + T L+ +LDG K+ G+ I I ATN P+ LD VRPGR DR + + PD + R QI + H + ++DV+ + T GFSGAD+ NLVN + + + G + D+ D+ +++ E + +S E ++L A HE GH ++A Sbjct: 318 AKKRSPCIIFMDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGI---------IVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDR-------IMMGSERKSAV---ISDESRKLTAYHEGGHALVA 497
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23 Identity = 63/164 (38.41%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRHARKDPRR----RATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 484 +A+ AP+ +F+DE+DAIA R D + T L+A+LDG R V I ATNR D LD +RPGR DR + + LP + R+QIF +H+ +LAEDV+F+EL T G SGADI+ + E+G+ ++R+ +K+ D ++K L Sbjct: 229 LAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIG---------ATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL 383
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23 Identity = 67/199 (33.67%), Postives = 101/199 (50.75%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 601 A++ +P +F+DEIDAI G KD + R T L+ +LDG K+ G+ I I ATN P LD VRPGR DR + + PD + R QI + H ++DV+ + T GFSGAD+ NLVN + + + G + D+ D+ +++ E + +S E ++L A HE GH ++A Sbjct: 311 AKKRSPCIIFMDEIDAIGGSRNPKDQQYMRMTLNQLLVELDGFKQNEGI---------IVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDR-------IMMGSERKSAV---ISDESRKLTAYHEGGHALVA 490
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.141e-23 Identity = 58/145 (40.00%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 442 AR++AP +F DEIDAIA P+R + + ++ T +D + + V+ I ATNRPD +D +RPGR+DR + + +PD K R+ IF +H+ LAEDVN EEL +T G++GADI L E+ +++VR+ K Sbjct: 541 ARQSAPCIIFFDEIDAIA-------PKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGK 678 HSP 2 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTE 514 A NAP+ +F+DEIDAIA ++D L+AQL T +D + R V+ I ATNRP+ LD RPGR DR + IG+PD + R +I +H+ LAEDV+ + L T GF GAD+ L E+ + ++R+ I + + + K++L+ + V + + Sbjct: 268 AEENAPSIIFIDEIDAIA---PKRDEATGEVERRLVAQL-----LTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLE--AEEIPKEVLDNLKVTMDD 426
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 64/199 (32.16%), Postives = 104/199 (52.26%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAG-RHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 601 AR+ AP+ +F+DE+DAI R+AR R T L+ LDG + L V+FI ATN P+ LD RPGR DR +++ LPD + R+ I H+ L +DV+ + T GF+GAD+ NL+N++ + + + + + +D+ D+ L+ ++ ++ E K + A HE GH ++A Sbjct: 355 ARKQAPSIIFIDELDAIGQKRNARDAAHMRQTLNQLLVDLDGFSKNE-----DLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGA----------ERKSAFITPENKLMTAYHEGGHALVA 538
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 62/162 (38.27%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 +AR AP+ +F+DEIDAI R R D + T L+A++DG +D I + I ATNR D LD +RPGR DR + I LPD + R +IF +H+ LAEDV+ ++L T G SGADI+ + E+G+M++R+ + D + +D+ Sbjct: 267 LAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDP---LDDIKV------IAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDR 419
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 61/203 (30.05%), Postives = 107/203 (52.71%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQSVSFEKKR---LLAVHEAGHIVLA 601 A++ AP VF+DEIDA+ + + + T L+ ++DG ++ G+ I + ATN PD LD RPGR DR + + PD + R +I +++ K ++ DV+ + T GF+GAD+ NLVN + I + +G K+ + D+ ++ E + +++E ++ C + + R L A HE+GH ++A Sbjct: 416 AKKKAPCIVFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGI---------IVMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARSTPGFNGADLANLVNIAAIKAAVEGADKLAAAQLEFAKDRIIMGTERKSMFISDESKKACLFKLLYFILRELILTAYHESGHAIVA 609
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23 Identity = 54/162 (33.33%), Postives = 95/162 (58.64%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 +AR+ AP+ +F+DE+D+IA R + D + T L+A++DG +R + I ATNRPD LD +RPGR DR +++ +P + R +I +H LAED++F++L T G SGAD++ + E+G+ +VR+ ++ ++ ++ ++K Sbjct: 247 MARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIR---------IIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEK 399
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23 Identity = 55/162 (33.95%), Postives = 95/162 (58.64%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 +AR+ AP+ +F+DE+D+IA R + D + T L+A++DG +R + I ATNRPD LD +RPGR DR +++ +P + R +I +H LA D++F++L T G SGAD++ + E+G+ +VRK + ++ +D ++ ++K Sbjct: 247 MARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIR---------IIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEK 399 The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bpback to top |