CX296765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22 Identity = 66/203 (32.51%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHAR-----KDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIV 595 AR+NAP +F+DEIDAI R + R +T L+ ++DG + + ++ TNRPD LD +RPGR DR++ I PD R QIF VH + A++++ + L T GF+GADI N+ NE +++ R +++Q +++ + G+ +K + +S E+K +A HEAGH V Sbjct: 384 ARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDG---------FTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIER-VTAGL---------EKKSRVLSPEEKNTVAHHEAGHAV 567
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22 Identity = 67/204 (32.84%), Postives = 106/204 (51.96%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQL--AEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598 A++ AP+ +F+DEIDA+A K + R T L+ ++DG AVI + ATNR D LD RPGR DR + + PD R I VH + K+L +DVN + T GF+GAD+ NLVNE+ +++ RK + +++ D + +++ + G+ +K + +K ++A HEAGH V+ Sbjct: 413 AKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDG---------FDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSI---AGI-------EKKSARLKGNEKAVVARHEAGHAVV 597
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22 Identity = 67/203 (33.00%), Postives = 108/203 (53.20%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHAR-----KDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIV 595 AR+ AP+ +F+DEIDAI R + R +T L+ ++DG +GV + + TNRPD LD +RPGR DR++ I PD K R QIF ++ +L + +F + L T GF+GADI N+ NE+ +++ R ++I Q +D+ ++ G+ +K + +S ++R +A HE+GH V Sbjct: 423 ARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGV---------VVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDR-IIGGL---------EKKNKVISKLERRTVAYHESGHAV 606
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 59/168 (35.12%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPR-RRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLL 508 A +NAPA +F+DEID+IA + + + R L+ +DG K R+ V + I ATNRP+ +D R GR DR + IG+PDA R+++ +H+ +LA+DV+ E L T G+ GADI +L +E+ + +R+ I + D +D ++L+ +GV + Sbjct: 303 AEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNV---------VVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE--DEIDAEVLDSLGVTM 459 HSP 2 Score: 77.7962 bits (190), Expect = 5.937e-14 Identity = 51/171 (29.82%), Postives = 87/171 (50.88%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL-LEGMGVLLTEE 517 AR AP VF+DE+D+IA + ++ QL T +D ++ ++ V I ATNRPD++D +RPGR+D+ +Y+ LPD R+ I + L + + T GFSGAD+ +V + +++ +Q + +K++ +EG V +T+E Sbjct: 576 ARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQL-----LTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHE----AEKEVKVEGEDVEMTDE 737
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.473e-22 Identity = 64/207 (30.92%), Postives = 110/207 (53.14%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHL 607 AR AP V++DEIDA+ + + + T L+ ++DG + VI + +TNR D LD +RPGR+DR ++I LP ++R +IF+ H G +L + +F + L T GFSGADI N+ NE+ + + R+GH+ + + +++ ++ G K + +S E++R++A HE+GH ++ L Sbjct: 397 ARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDG---------MGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVER-VIAGTA---------KKSKILSKEEQRVVAFHESGHALVGWL 584
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.473e-22 Identity = 59/162 (36.42%), Postives = 95/162 (58.64%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRH----ARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 478 +A+R AP+ +F+DEIDAI + + + T L+A+LDG +D + + I ATNR D LD +RPGR DR + + LPD K R +IF+++ ++ +++N E L T GFSGADI+N+ E+ M++R G +K+ D+V+ ++K Sbjct: 222 MAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDP---LDNVKI------IAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINK 374
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 67/204 (32.84%), Postives = 104/204 (50.98%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQL--AEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 598 A++ AP+ +F+DEIDA+A K + R T L+ ++DG AVI + ATNR D LD RPGR DR + + PD R I VH + K+L +DVN + T GF+GAD+ NLVNE+ +++ RK + + D + +++ + G+ +K + +K ++A HEAGH V+ Sbjct: 417 AKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDG---------FDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSI---AGI-------EKKTARLKGSEKAVVARHEAGHAVV 601
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22 Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRH----ARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQK 529 +A+R AP+ +F+DEIDAI + + + T L+A+LDG +D + + I ATNR D LD +RPGR DR + + LPD + R +IF+++ ++ +++N E L + GFSGADI+N+ E+ M++R G +K+ +D+VD + K ++ + +E ++K Sbjct: 222 MAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNP---LDNVKI------IAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERREK 391
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22 Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRH----ARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQK 529 +A+R AP+ +F+DEIDAI + + + T L+A+LDG +D + + I ATNR D LD +RPGR DR + + LPD + R +IF+++ ++ +++N E L + GFSGADI+N+ E+ M++R G +K+ +D+VD + K ++ + +E ++K Sbjct: 222 MAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNP---LDNVKI------IAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERREK 391
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22 Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 2 Query: 5 IARRNAPAFVFVDEIDAIAGRH----ARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQK 529 +A+R AP+ +F+DEIDAI + + + T L+A+LDG +D + + I ATNR D LD +RPGR DR + + LPD + R +IF+++ ++ +++N E L + GFSGADI+N+ E+ M++R G +K+ +D+VD + K ++ + +E ++K Sbjct: 222 MAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNP---LDNVKI------IAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERREK 391 The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bpback to top |