CX296769
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48 Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = -3 Query: 243 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 716 MS+IPS FG RR+NV +P SLD+WDPF + L ++ + +ET+ FAN IDWKETPQAHVFKADLPGL+ G++LQISGER+KE+EEKN+KWHRVE SSGKFLRRFRLP+NA V++VKA MENGVLTVT K+I ISG Sbjct: 1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.236e-47 Identity = 102/157 (64.97%), Postives = 115/157 (73.25%), Query Frame = -3 Query: 243 RRTNVFDPVSLDVWDPFDGFL-----SSALTNAPSSAR----ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 686 RR+NVFDP SLD+WDPFDGF SS+ + PS R ET+ FA ARIDWKETP+AHVFKAD+PGL+ G ILQISGER+KEQEEK D+WHRVERSSGKFLRRFRLPDNAK EQ+KASMENGVLTVT K+I+ISG Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47 Identity = 98/160 (61.25%), Postives = 114/160 (71.25%), Query Frame = -3 Query: 243 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 716 MSLIPSIFGG R+NVFDP SLD+WDPF F + P+S+ E S F N R+DWKET +AHV KAD+PGL+ R+LQISGER+ E+E+KND WHRV+RSSGKF+RRFRLP+NAKVEQVKA MENGVLTVT K IEISG Sbjct: 1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47 Identity = 101/159 (63.52%), Postives = 117/159 (73.58%), Query Frame = -3 Query: 243 MSLIPSIFGGRR-TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 716 MSLIP IFG RR T+VFDP S+DV+DPF L S++ ETS FAN RIDWKETP+AHVFKADLPGL+ R+LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVT K+IEISG Sbjct: 1 MSLIPRIFGDRRSTSVFDPFSIDVFDPF-----KELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47 Identity = 89/139 (64.03%), Postives = 107/139 (76.98%), Query Frame = -3 Query: 300 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 716 MS+IPS F +R+N+FDP SLD WDPF G +S+ ARET+ NARIDWKETP+AHV KADLPG++ GR+LQISGER +EQEEK+D WHRVERSSGKF+RRFRLP+NAK+++VKA MENGVLTV Sbjct: 1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIIST------EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTV 133
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.367e-46 Identity = 95/157 (60.51%), Postives = 112/157 (71.34%), Query Frame = -3 Query: 243 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSS---------ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 686 RR+NVFDP SLD+WDPFDGF + + + S + ET+ FA ARIDWKETP+AHVFKAD+PGL+ G +LQISGERSKEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT K+I+++G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG 161
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.785e-46 Identity = 93/148 (62.84%), Postives = 111/148 (75.00%), Query Frame = -3 Query: 243 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 686 RR+NVFDP SLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA MENGVLTVT KAIEISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.976e-46 Identity = 92/148 (62.16%), Postives = 111/148 (75.00%), Query Frame = -3 Query: 243 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 686 RR+NVFDP SLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA +ENGVLTVT KAIEISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 5.193e-46 Identity = 93/150 (62.00%), Postives = 110/150 (73.33%), Query Frame = -3 Query: 243 RRTNVFDPVSLDVWDPFDGFLSSALTNA--PSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 686 RR+NVFDP SLD+WDPFDGF + + + P + + + FA ARIDWKETP+AHVFKAD+PGL+ G +LQISGER KEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT K+I+I+G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
BLAST of CX296769 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.511e-45 Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = -3 Query: 243 MSLIPSIFGGRRTN-VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXX*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 716 MSLIP IFG RR++ +FDP S+DV+DPF L +++ ETS FAN RIDWKETP+AHVFKADLPGL+ R+LQISGER+ E+E+KNDKW RVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVT K+IEISG Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPF-----RELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154 The following BLAST results are available for this feature:
BLAST of CX296769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296769 ID=CX296769; Name=CX296769; organism=Citrus clementina; type=EST; length=742bpback to top |