CX296771

Overview
NameCX296771
Unique NameCX296771
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5617 contig Ccv1_Contig5617:940..1675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = -1
Query:  404 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPML 721
            A A++ DH+P + DE+ RIE  GG+V +  GTWRV G LAVSRA GD+ LKQ+++A+PE K   +    EFLILASDGLWD V+N+EA+ + +P   S  A + +L
Sbjct:  187 AIAVSRDHKPDQSDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLL 291          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A A++ DH+P + DE+ RIE  GG+V +  GTWRV G LAVSRA GD+ LKQ+++ +PE +   I    EFLILASDGLWD V+N+EA+D+ R    SI  PE   A KKL
Sbjct:  149 AIAVSKDHKPDQTDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTR----SIHDPEE--AAKKL 252          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A AL+ DH+P+R DE+ RIE+ GG + +  GTWRV G LA+SRA G+R LKQ+++AEPE + + I  E E L+LASDGLWD V N++A+ +A+         EP  A +KL
Sbjct:  224 AIALSDDHKPNRSDERKRIESAGGVI-MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQ------SEEEPEAAARKL 327          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = -1
Query:  413 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPE 721
            A A++ DH+P + DE+ RIE  GG+V +  GTWRV G LAVSRA GDR LKQ+++A+PE +  ++    EFLILASDGLWD VSN+EA+ + +    +I+ PE
Sbjct:  156 AIAVSRDHKPDQSDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIK----AIEDPE 253          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22
Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A A++ DH+P + DE+ RIE  GG+V +  GTWRV G LAVSRA GDR LKQ+++A+PE +  +I    EFLILASDGLWD  SN+EA+ + +      +  +P  + KKL
Sbjct:  156 AFAVSRDHKPDQSDERERIENAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVK------EVEDPEESTKKL 259          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.778e-22
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A AL+SDH+P+R+DE+ RIE  GG V    GTWRV G LA+SRA G+R LK++++AEPE +   I  + EFLILASDGLWD VSN+ A+     F ++ + PE   A +KL
Sbjct:  238 AIALSSDHKPNRKDERKRIENAGGVVTWS-GTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAV----AFVKAEEGPE--AAARKL 341          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A AL+ DH+P+R DE+ RIE+ GG V +  GTWRV G LA+SRA G+R LKQ+++A+PE +   I  E EFLILASDGLWD V N++A+ + +         EP  A +KL
Sbjct:  352 AIALSEDHKPNRSDERKRIESAGGVV-MWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVK------IEEEPEAAARKL 455          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A A++ DH+P + DE+ RIE  GG+V +  GTWRV G LAVSRA GDR LKQ+++A+PE +  +I    EFLILASDGLWD  SN+ A+ + +      +  +P  + KKL
Sbjct:  156 AIAVSRDHKPDQSDERERIENAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVK------EVEDPEDSAKKL 259          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.669e-20
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = -1
Query:  443 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIAR 721
            A AL+ DH+P+R DE+ RIE  GG V +  GTWRV G LA+SRA G+R LK +++AEPE +   +  + E L+LASDGLWD V N+EA+ +A+
Sbjct:  234 AMALSEDHKPNRSDERKRIENAGGVV-IWAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAK 325          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19
Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = -1
Query:  443 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIAR 721
            A  L+ DH+P R DE+ RIE  GG++ +  GTWRV G LAVSRA GD+ LK ++IAEPE +   I    EF+++ASDGLW+ +SN++A+ I R
Sbjct:  246 AVPLSDDHKPDRSDERQRIEDAGGFI-IWAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDIS-TLEFIVVASDGLWNVLSNKDAVAIVR 336          
The following BLAST results are available for this feature:
BLAST of CX296771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
P2C59_ORYSJ6.130e-2350.94Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C45_ORYSJ3.043e-2253.15Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C76_ARATH3.974e-2249.55Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C59_ARATH3.974e-2252.43Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C71_ARATH5.190e-2249.55Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C07_ORYSJ6.778e-2252.25Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C52_ORYSJ8.852e-2250.45Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C69_ARATH5.738e-2148.65Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C13_ORYSJ1.669e-2052.69Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C11_ARATH5.371e-1951.61Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05802F05SK FerrChloL1 Citrus clementina cDNA clone C05802F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296771 ID=CX296771; Name=CX296771; organism=Citrus clementina; type=EST; length=736bp
TGCCGAATTCGGCACGAGGATTGAATCCTTTTATTTGTATTTGCTTTGAA
CTTGTACACTAAGTTTATGCTTAATTATTATAATAGCTGATAAGTAATGT
TACACAAAGAATGAACTTATTTACAAATCAAAGAACAAAAAATTATCTAT
GACTGGTATCAATTCTCTTCTTCAATTGTAGGTGGAAATGTCCTCCCTAG
ATGATTGATTAAAAGCTACTTGGAATAATTCACCTAATGGTAACTAAGCA
AGAGAAATTTTATTCGGCCTCGGCGTTAGTTCAATTTTCTACTGTATGTT
GTTTTGGGATGATTCAAAGATAGCGCCCCAGTTGAATCAGCATCACACTA
ACATCATCAACTGAGCCCCGTGAAACAGAGAGATCTACAAGCTTCTTACA
CGCTAACATTGGTTCTGGTGCATCAATGCTTTGGCAAAAAGGGCGAGCAA
TGTCAATTGCTTCTTGATTACTGACCTTATCCCAGAGGCCATCAGATGCT
AAGATTAGGAACTCGTATTCGGGTTTGATTCGAATGATTTTAGTCTCTGG
CTCGGCTATGATCCATTGCTTAAGGTGCCGATCCCCAAGGGCTCTAGACA
CAGCTAGAGACCCCTGAACTCTCCATGTACCGTGACATAAATCAACATAG
CCGCCCATCGTCTCAATTCTGCTCTTTTCATCTTCCCTAGAGGGCCGGTG
GTCTGAAGTGAGTGCCTCGGCAAGCCTCCTCTGCTC
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