CX296779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_NEOSM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Neorickettsia sennetsu (strain Miyayama) GN=ispF PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.328e-28 Identity = 62/162 (38.27%), Postives = 98/162 (60.49%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYP-----LIIGGINVPHERGCEAHSDGDVLLHCVVDAILGAL---GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 +RVG G+D+H+++ +++ G++VP E AHSDGDV LH +VDA+LGA G DIG +FPD+D KW+G SS F++ V L+ AGY + N D T++ + P++ YK ++ +++LL +N+ A T EK+ G IAA+ ++ L Sbjct: 2 YRVGFGYDVHKIDKPVKTGNTCIVLCGVSVPCEYKVIAHSDGDVALHALVDALLGAACIEGANDIGMLFPDTDEKWRGKSSSYFVEHVVTLIQRAGYVVNNADLTIVCETPRIQQYKSEMQQQVADLLCVRKEQINVKATTTEKLGFEGRKEGIAAYAIVSL 163
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_NITSB (Bifunctional enzyme ispD/ispF OS=Nitratiruptor sp. (strain SB155-2) GN=ispDF PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.346e-28 Identity = 59/147 (40.14%), Postives = 91/147 (61.90%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAA 673 R+G+G D+H L + GI +P+++G HSD DV +H ++DA+LGA G DIG++FPDSD +K S + E VRL+ G+ I ++D T++ Q PK+ P+KE ++ +L +LL ++NL A T E + +G N IAA Sbjct: 213 RIGNGLDVHAFCEDRKLYLCGIEIPYDKGLAGHSDADVAIHALIDALLGAAGFGDIGELFPDSDETYKDIDSKKLLCETVRLLRACGFVIEHVDLTIVAQNPKIGPFKEKMKESLHDLLQIPYHLINLKATTTEHLGFVGRNEGIAA 359
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_AZOC5 (Bifunctional enzyme ispD/ispF OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=ispDF PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.346e-28 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAA 673 R G GFD+H PG +++GG+ +P +RG + HSD DV LH + DA+LGAL DIG FP SDP+WKGA S F+ A+ + E G + +LD TLI + PK+ P+++ IR ++ + V++ A T EK+ G IAA Sbjct: 231 RTGTGFDVHAFGPGDHVMLGGVAIPFDRGLDGHSDADVGLHALTDAVLGALADGDIGAHFPPSDPQWKGATSDRFLAFAIERVRERGGIVAHLDLTLICEAPKVGPHRDAIRAEIARICDLPLGRVSVKATTTEKLGFTGRREGIAA 377
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_WIGBR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Wigglesworthia glossinidia brevipalpis GN=ispF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 61/154 (39.61%), Postives = 99/154 (64.29%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 RVGHGFD+H+ Y PLI+GG+++P+ +G +HSDGDV++H ++D++LGA L DIG +FP++D K+K S + ++ + + Y+IGN+D TL L+ PK+S Y I +S L V+N+ + T E + +G+ + IA+ V +L Sbjct: 2 RVGHGFDIHKFGKIYKPLILGGVHIPYCKGVVSHSDGDVIIHSIIDSLLGASSLGDIGILFPNNDIKYKNINSCILLQVVWNCIKKK-YKIGNIDVTLFLEYPKISSYTNKICLCISNCLKCKTDVINIKSKTMEGLGEIGKKKGIASEAVSVL 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_CHLCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Chlorobium chlorochromatii (strain CaD3) GN=ispF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 61/153 (39.87%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G G D+H G L+IGG+ +P G + HSD DVLLH + DA+LGA L DIG FP++ ++K S + +K +L+ E GY N+DA L+L+ PK++PY + +R N+++ LG V + A T+EK+ +G AH V L+ Sbjct: 2 RIGIGIDVHPFAAGRKLVIGGVYIPGHDGLDGHSDADVLLHAISDALLGAAALGDIGLHFPNTSAEFKDIDSMILLKHVGKLLAEHGYAPVNVDAMLLLEAPKIAPYIQQMRQNIADALGLQVGDVAVKATTNEKLGYIGRKEGAEAHAVCLI 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_ANAMM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anaplasma marginale (strain St. Maries) GN=ispF PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 61/159 (38.36%), Postives = 96/159 (60.38%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYP----LIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVIL 688 +PFRVG G+D+H P +++ G+ + R +AHSDGDV H +VDA+LG +G IG+ FP++DP+W+ S+ F+ EA GY + N D T++ + PK+ P+ ++ +S+LLG D + +N+ A T EK+ +G IAAH V+L Sbjct: 8 VPFRVGIGYDVHGFADSPPENGHIVLCGVEIAFHRKIKAHSDGDVGTHALVDALLGCVGEGSIGEHFPNTDPRWENMSSTHFLLEAQSKALAKGYAVLNFDLTIVCELPKIIPHVPKMKLFMSKLLGMDASAINIKAVTTEKLGFIGRGEGIAAHAVVL 166
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_HELPG (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori (strain G27) GN=ispDF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 59/144 (40.97%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSI 667 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DA+LGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I +LS+LLG + + ++L A T EK+ +G+ + Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAVLGAIKGGDIGEWFPDNDPKYKNASSKELLKVVLDFSQSIGFELLEMGATIFSEIPKITPYKPAILESLSQLLGLEKSQISLKATTMEKMGFIGKQEGL 392
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_DESPS (Bifunctional enzyme ispD/ispF OS=Desulfotalea psychrophila GN=ispDF PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 60/153 (39.22%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+GHGFD H+L LI+GG+ +P+ G HSD DVL+H + DA+LGA+G DIG+ FPDS +K S ++ ++ + E Y+IGN D ++I Q PKL+PY + ++ ++ + +N+ A T EK+ G I+ H V+LL Sbjct: 232 RIGHGFDAHQLVEKRRLILGGVEIPYHLGLAGHSDADVLVHALCDALLGAIGAGDIGRHFPDSSDAFKDIYSIRLLESVMQKVGELNYKIGNADISVICQAPKLAPYLKQMQEIIATSCACQISDINIKATTTEKMGYTGRGEGISCHAVVLL 384
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_THET2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ispF PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28 Identity = 60/134 (44.78%), Postives = 84/134 (62.69%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHE 634 R+G+G D HRLE G PL + G+ +P G AHSDGD LH + DA+L A GL DIG +FPD+DP+W+G S VF++EA+RL++ G + L L RPKL P+++ + +L+ LL + LT T E Sbjct: 2 RIGYGEDSHRLEEGRPLYLCGLLIPSPVGALAHSDGDAALHALTDALLSAYGLGDIGLLFPDTDPRWRGERSEVFLREALRLVEARGARLLQASLVLTLDRPKLGPHRKALVDSLARLLRLPQDRIGLTFKTSE 135
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_PELUB (Bifunctional enzyme ispD/ispF OS=Pelagibacter ubique GN=ispDF PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTV 682 + G GFD+HRL P L +GG+ +P G HSDGD +LH V DAILGA + DIG+ F D + K+K S++ + E ++ + GY I NLD +I Q+PK+ YK+ I ++++ PT +N+ T EK+ +G+ ++IA + Sbjct: 215 KFGIGFDVHRLVPNKKLYLGGVKIPSPIGTLGHSDGDPVLHAVTDAILGACSMGDIGEKFSDKNKKFKNIRSTILLSEIIKQTLKKGYLINNLDINIITQKPKIQKYKKQILNCIAKICNISPTQINIKGKTTEKLGVIGKEKAIACEVI 364 The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bpback to top |