CX296779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJJ (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=ispDF PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28 Identity = 58/144 (40.28%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA GL DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N+ A T EK+ +G +A Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMA 356
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJ8 (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=ispDF PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28 Identity = 58/144 (40.28%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA GL DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N+ A T EK+ +G +A Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMA 356
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJR (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni (strain RM1221) GN=ispDF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.265e-27 Identity = 58/144 (40.28%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA GL DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N+ A T EK+ +G +A Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMA 356
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJE (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni GN=ispDF PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.265e-27 Identity = 58/144 (40.28%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA GL DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N+ A T EK+ +G +A Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMA 356
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_WOLSU (Bifunctional enzyme ispD/ispF OS=Wolinella succinogenes GN=ispDF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 G GFD+H G L + G+N+P +AHSDGDV +H ++DA+LGA G DIG+ FPDSD +KG S++ ++E ++ + G+E+ N D T++ Q PKLSPYKE + L E++ +++ A T E + +G +A ++L Sbjct: 216 GSGFDVHAFMEGEGLRLAGVNIPAPVTFKAHSDGDVAIHALIDALLGAAGAGDIGEWFPDSDLAYKGVDSTLLLQEVIKFIRGIGFELINADLTIMAQAPKLSPYKEAMERRLGEVMEVSRQRISVKATTTESLGFVGRKEGVAVSAQVVL 366
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=ispF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 58/153 (37.91%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I + PK+ PY +R+NLS L + +++ + T +K+ +G +IA H++++L Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLSLDLNTEIDNISIKSTTSKKIGCIGRKEAIACHSIVML 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 58/153 (37.91%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I + PK+ PY +R+NLS L + +++ + T +K+ +G +IA H++++L Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLSLDLNTEIDNISIKSTTSKKIGCIGRKEAIACHSIVML 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BUCA5 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=ispF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 58/153 (37.91%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I + PK+ PY +R+NLS L + +++ + T +K+ +G +IA H++++L Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLSLDLNTEIDNISIKSTTSKKIGCIGRKEAIACHSIVML 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_DESVV (Bifunctional enzyme ispD/ispF OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ispDF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAA 673 VG G+D+HR G P+ +GG+ +P AHSDGDVLLH + DA+LG +G DIG FPDSD + A S++ + + + EA + ++D T++ Q PKLSP+++ IR N++ LL T VN A T E + GE R I A Sbjct: 239 VGWGYDVHRYGEGRPMKLGGVLIPEGPEVVAHSDGDVLLHALADALLGCIGAGDIGLHFPDSDAAFDNANSAMLLDRVLHMTHEARLRLTHVDLTIVAQVPKLSPWRDKIRANVARLLDLPVTSVNFKATTEEGLGFTGEKRGIKA 384
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_DESVH (Bifunctional enzyme ispD/ispF OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ispDF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAA 673 VG G+D+HR G P+ +GG+ +P AHSDGDVLLH + DA+LG +G DIG FPDSD + A S++ + + + EA + ++D T++ Q PKLSP+++ IR N++ LL T VN A T E + GE R I A Sbjct: 239 VGWGYDVHRYGEGRPMKLGGVLIPEGPEVVAHSDGDVLLHALADALLGCIGAGDIGLHFPDSDAAFDNANSAMLLDRVLHMTHEARLRLTHVDLTIVAQVPKLSPWRDKIRANVARLLDLPVTSVNFKATTEEGLGFTGEKRGIKA 384 The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bpback to top |