CX296780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_BOVIN (40S ribosomal protein S27 OS=Bos taurus GN=RPS27 PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27L_RAT (40S ribosomal protein S27-like protein OS=Rattus norvegicus GN=Rps27l PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27L_MOUSE (40S ribosomal protein S27-like protein OS=Mus musculus GN=Rps27l PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27L_HUMAN (40S ribosomal protein S27-like protein OS=Homo sapiens GN=RPS27L PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27L_BOVIN (40S ribosomal protein S27-like protein OS=Bos taurus GN=RPS27L PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLDEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_NEUCR (40S ribosomal protein S27 OS=Neurospora crassa GN=rps-27 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.852e-25 Identity = 52/78 (66.67%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 66 IDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 +DLLNP LV +P SFFMDVKC GCF ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 5 VDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_PONAB (40S ribosomal protein S27 OS=Pongo abelii GN=RPS27 PE=3 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.169e-24 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 D L+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DPLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_HOMAM (40S ribosomal protein S27 OS=Homarus americanus GN=RPS27 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.688e-23 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQ PNS+FMDVKC GCF I+TVFSH+QTVV C C +VLCQPTGG+A+LT+GCSFR+K Sbjct: 6 DLLHPSPSEEKRKCKLKRLVQHPNSYFMDVKCPGCFKISTVFSHAQTVVACVGCATVLCQPTGGKAKLTDGCSFRKK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_CAEEL (40S ribosomal protein S27 OS=Caenorhabditis elegans GN=rps-27 PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23 Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 66 IDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 +DLL+P RLVQ PNS+FMDVKC GCF I+TVFSH+ TVVVC C +VLCQPT G+A+LTEGCSFR+K Sbjct: 5 VDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCNTVLCQPTRGKAKLTEGCSFRKK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27B_YEAST (40S ribosomal protein S27-B OS=Saccharomyces cerevisiae GN=RPS27B PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.519e-21 Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P A LVQ P S+F+DVKC GC NITTVFSH+QT V C +C +VLC PTGG+A+L+EG SFRRK Sbjct: 6 DLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTVLCTPTGGKAKLSEGTSFRRK 82 The following BLAST results are available for this feature:
BLAST of CX296780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296780 ID=CX296780; Name=CX296780; organism=Citrus clementina; type=EST; length=506bpback to top |