CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3B_PONAB (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo abelii GN=IDH3B PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.284e-41 Identity = 84/165 (50.91%), Postives = 107/165 (64.85%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF C EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L + I +A+ I GK RT D+GG STT+DF K++ HL Sbjct: 216 VHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3B_HUMAN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo sapiens GN=IDH3B PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.284e-41 Identity = 84/165 (50.91%), Postives = 107/165 (64.85%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF C EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L + I +A+ I GK RT D+GG STT+DF K++ HL Sbjct: 216 VHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.189e-41 Identity = 84/164 (51.22%), Postives = 108/164 (65.85%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIAL---AEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 +HKANIM+ DGLF CREVA+KYP ITY E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+G A A + I +N ANP ALLLSS MLRHL+ ADR++ A+ IAEGK RT DLGG+STT + A+ Sbjct: 199 VHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAV 362
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3G_MACFA (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40 Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF CREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS+ + I H+ Sbjct: 181 VHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDIIRHI 345
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3G_BOVIN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos taurus GN=IDH3G PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40 Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF CREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS+ + I H+ Sbjct: 218 VHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDIIRHI 382
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3G_HUMAN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo sapiens GN=IDH3G PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.201e-39 Identity = 78/165 (47.27%), Postives = 107/165 (64.85%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF CREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS+ + + H+ Sbjct: 219 VHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVIRHI 383
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3G_RAT (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Rattus norvegicus GN=Idh3g PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.495e-39 Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF CREVA +YP+IT++ +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS + I H+ Sbjct: 219 VHKANIMKLGDGLFLQCCREVAARYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHI 383
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39 Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNL------ANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF C+EVA+KYP I Y E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+ G A G++ GK+ ANP ALLLSS MLRHL+ ADR++ A+ IAEG RT DLGG+STT + A+ +L Sbjct: 199 VHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNCCMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNV---GAEYAVFEQGASAGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANL 366
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3G_MOUSE (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Mus musculus GN=Idh3g PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.787e-39 Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKANIM+ DGLF CREVA YP+IT++ +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS + I H+ Sbjct: 219 VHKANIMKLGDGLFLQCCREVAAHYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHI 383
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH3B_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C37E2.1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.735e-38 Identity = 75/163 (46.01%), Postives = 105/163 (64.42%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 +HKANIM+ DGLF C VA++YP+I +E ++IDN CM LV P FDV+VMPNLYG+II +L AGL+GG G+ P ++G + S + G+++ANPTA++L + ML HL L + ++ A+ + EGK RT DLGG +TT DF A+ D Sbjct: 213 VHKANIMKLGDGLFLRTCEGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVMPNLYGNIIDNLAAGLVGGAGVVPGQSVGRDFVIFEPGSRHSFQEAMGRSIANPTAMILCAANMLNHLHLDAWGNSLRQAVADVVKEGKVRTRDLGGYATTVDFADAVID 375 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |