CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSJ (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain JLS) GN=leuB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22 Identity = 57/154 (37.01%), Postives = 91/154 (59.09%), Query Frame = -2 Query: 282 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 728 +HK N++ L+ +EV +YP++ +D+ + +V +P FDV+V NL+GDI++DL A + GG+GL S NI ++ E VHGSAPDIAG+ +A+PTA ++S +L H+ D A R+ A+ LS+ + + TA +G Sbjct: 176 VHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHVDSAMIHIVTDPGRFDVIVTDNLFGDIVTDLAAAVCGGIGLAASGNIDATRTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLAHVGETDAAARVDKAVEAHLSSRGDQELGTAAVG 329
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACCA (3-isopropylmalate dehydrogenase OS=Bacillus caldotenax GN=leuB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22 Identity = 54/119 (45.38%), Postives = 79/119 (66.39%), Query Frame = -2 Query: 372 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR 728 + KAN++ + L+ V EVA ++P++T E +++D M L++ P FDV+V N++GDI+SD + L G LG+ PS ++ G +L E VHGSAPDIAG N ANP A +LS+ MLR Sbjct: 189 VDKANVLSSSR-LWREVAEEVANEFPDVTLEHMLVD-MRMQLIRAPKQFDVIVTENMFGDILSDEASMLSGSLGMLPSASLSASGPSLYEPVHGSAPDIAGMNKANPIAAILSAAMMLR 305
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_CEPAC (3-isopropylmalate dehydrogenase OS=Cephalosporium acremonium GN=LEU2 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 62/157 (39.49%), Postives = 97/157 (61.78%), Query Frame = -2 Query: 234 AEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNI----GEG--GIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTI---AEG--KYRTADLGGSSTTSDFTKAICDHL 665 A+++P+IT + + D+ M++V++P F+ V+ N +GDI+SD+ + G LGL PS ++ GEG + E VHGSAPDI+GK LANP A +LS MLR+ + L +A ++ A++ + +EG + RT DLGG +T S A+C+ L Sbjct: 215 AKEFPDITLQHQLADSMAMLMVRDPRRFNGVIHTDNTFGDILSDISGAITGTLGLMPSASLCGVPGEGHRSNGIYEPVHGSAPDISGKGLANPVAQILSVAMMLRYSMGLEKEATAVERAVVKVLDAKSEGGLEIRTGDLGGRATCSQVGDAVCEVL 371
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_RHOS4 (3-isopropylmalate dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=leuB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21 Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = -2 Query: 279 KYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI-----ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGG 659 +YP++ + DN M LV+ P FDV+V NL+GDI+SD A L G LG+ PS ++G AL E VHGSAPDIAG+ ANP A +LS LR+ ++ ++A R++ A+ + +A+G RTADL G Sbjct: 214 EYPDVELSHMYADNGAMQLVRWPRQFDVIVTDNLFGDILSDCAAMLTGSLGMLPSASLGAPMANGRPKALYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDMGEEATRLEKAVETVLADG-VRTADLMG 345
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_DEHSC (3-isopropylmalate dehydrogenase OS=Dehalococcoides sp. (strain CBDB1) GN=leuB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21 Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNI------GEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN++ + L+ + EVA+ YPE+ E V++D C M L+ P FDV+V NL+GDI++D + L G +G+ PS ++ G L E +HGSAP IA +N+ANP A +LS MLR+ L +A I++A+ +A G Y T D+ Sbjct: 190 VDKANVLLSSR-LWRQIVIEVAKDYPEVKVEHVLVDACAMKLILAPTYFDVIVTENLFGDILTDEASMLAGSMGMLPSASLAGIPAKGTKIFGLYEPIHGSAPTIAKQNIANPIATILSIAMMLRYSCGLETEAVEIESAVDKVLAAG-YATIDI 342
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_DEHE1 (3-isopropylmalate dehydrogenase OS=Dehalococcoides ethenogenes (strain 195) GN=leuB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21 Identity = 59/155 (38.06%), Postives = 92/155 (59.35%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNI------GEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN++ + L+ + E+A+ YP+IT E +++D C M L+ P FDV+V N++GDI++D + L G +G+ PS ++ G L E +HGSAP IA +N+ANP A +LS MLR+ L +A I+ A+ +A G Y T D+ Sbjct: 190 VDKANVLLSSR-LWRQIVIEIAKDYPDITVEHILVDACAMKLILAPTYFDVIVTENMFGDILTDEASMLAGSMGMLPSASLAGIPAKGTKTFGLYEPIHGSAPTIAKQNIANPIATILSIAMMLRYSCGLETEAAEIEAAVDKVLAAG-YATIDI 342
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_PSEPK (3-isopropylmalate dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=leuB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21 Identity = 56/149 (37.58%), Postives = 87/149 (58.39%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN++ + L+ V +VA+ YP++ + +DN M LV+ P FDV+V N++GDI+SD + L G +G+ PS ++ + E HGSAPDIAG +ANP A +LS MLR+ A+ I+ A+ + +G RT D+ Sbjct: 190 VDKANVLASSQ-LWREVVEDVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDADNKGMYEPCHGSAPDIAGLGIANPLATILSVSMMLRYSFNQSAAAEAIEKAVSLVLDQG-LRTGDI 336
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_MYCPA (3-isopropylmalate dehydrogenase OS=Mycobacterium paratuberculosis GN=leuB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21 Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = -2 Query: 282 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 728 +HK N++ L+ + EV YP++ ID + +V +P FDV+V NL+GDII+DL A + GG+GL S NI ++ E VHGSAPDIAG+ +A+PTA ++S +L HL A R+ A+ L+T + T ++G Sbjct: 176 VHKTNVLTFAGKLWSRIVAEVGRDYPDVEVAYQHIDAATIFMVTDPGRFDVIVTDNLFGDIITDLSAAVCGGIGLAASGNIDGTRTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLAHLGEDAAATRVDRAVERYLATRGNERPATTEVG 329
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: TTUC_ECOLI (Probable tartrate dehydrogenase/decarboxylase OS=Escherichia coli (strain K12) GN=yeaU PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21 Identity = 62/148 (41.89%), Postives = 83/148 (56.08%), Query Frame = -2 Query: 243 VAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHD-KADRIQNAILSTIAE---GKYRTADLGGSSTTSDFTKAIC 668 +AE YPEI +++ ID C V P FDV+V NL+GDI+SDL G +G+ PS N+ +L E VHGSAPDI GKN+ANP A + + ML L D + + N IL+ I E +T D+ G++TT AIC Sbjct: 209 MAENYPEIRWDKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFPSLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIAHGPKTPDMKGNATTPQVADAIC 356
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_SACEN (3-isopropylmalate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=leuB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21 Identity = 54/141 (38.30%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 312 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 728 +HK N++ L+ V EV+ ++P++T +D + +V +P+ FDV+V NL+GDII+DL + GG+GL S NI ++ E VHGSAPDIAG+ A+PTA +LS +L H+ + A R++ A+ +A Sbjct: 177 VHKTNVLTHAGSLWSRVVEEVSLQHPDVTVAYQHVDATTIHMVTDPSRFDVIVTDNLFGDIITDLAGAITGGIGLAASGNIDATRRNPSMFEPVHGSAPDIAGQGTADPTAAVLSVALLLDHVGQSEAARRVEAAVAFDLA 317 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |