CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BRUAB (3-isopropylmalate dehydrogenase OS=Brucella abortus GN=leuB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20 Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = -2 Query: 240 EKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 662 EK+ ++ E ++ D M LV+ P FDV++ NL+GD++SD+ A L G LG+ PS ++G AL E VHGSAPDIAGK +ANP A++ S LR+ L +ADR++ AI + +G RTAD+ T T + D Sbjct: 213 EKHADVQLEHMLADAGGMQLVRWPKQFDVILTDNLFGDLLSDVAAMLTGSLGMLPSASLGAADSKTGKRKALYEPVHGSAPDIAGKGIANPIAMIASLAMCLRYSFGLVAEADRLEAAIAGVLDDG-IRTADIWSEGNTKVGTTEMGD 359
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BRUA2 (3-isopropylmalate dehydrogenase OS=Brucella abortus (strain 2308) GN=leuB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20 Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = -2 Query: 240 EKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 662 EK+ ++ E ++ D M LV+ P FDV++ NL+GD++SD+ A L G LG+ PS ++G AL E VHGSAPDIAGK +ANP A++ S LR+ L +ADR++ AI + +G RTAD+ T T + D Sbjct: 213 EKHADVQLEHMLADAGGMQLVRWPKQFDVILTDNLFGDLLSDVAAMLTGSLGMLPSASLGAADSKTGKRKALYEPVHGSAPDIAGKGIANPIAMIASLAMCLRYSFGLVAEADRLEAAIAGVLDDG-IRTADIWSEGNTKVGTTEMGD 359
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_RHILO (3-isopropylmalate dehydrogenase OS=Rhizobium loti GN=leuB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAE-KYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + K N+M K+ L+ V + + +Y ++ + ++ D M LV+ P FDV+V NL+GD++SD+ A L G +G+ PS ++G + AL E VHGSAPDIAGK +ANP A++ S LR+ + D+ADR++ AI + + +G RT D+ Sbjct: 191 MEKRNVM-KSGVLWNEVVTQTHKARYADVKLDHMLADAGGMQLVRWPKQFDVIVTDNLFGDMLSDIAAMLTGSIGMLPSASLGAPDVKTKKRKALYEPVHGSAPDIAGKGIANPIAMIASFAMCLRYSFGMVDEADRLEGAIAAVLDQG-LRTKDI 344
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_RHIL3 (3-isopropylmalate dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=leuB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.634e-20 Identity = 64/156 (41.03%), Postives = 94/156 (60.26%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAE-KYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGI----ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + K N+M K+ L+ V E + KY ++ E ++ D M LV+ P FDV+V NL+GD++SD+ A L G LG+ PS ++G +G AL E VHGSAPDIAGK +ANP A++ S LR+ L +AD ++ AI + + +G RT D+ Sbjct: 191 MEKRNVM-KSGVLWNQVVTETHKAKYSDVQLEHMLADAGGMQLVRQPKQFDVIVTDNLFGDMLSDVAAMLTGSLGMLPSASLGAPDGKTGKRKALYEPVHGSAPDIAGKGIANPIAMIASFAMCLRYSFNLVKEADDLEKAIANVLDKG-IRTGDI 344
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAAR (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain MRSA252) GN=icd PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.634e-20 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = -2 Query: 312 SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 683 +V +E AEK +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++++LSSV ML HL + AD+I ++I TIA Sbjct: 266 NVAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIA 390
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_RHIEC (3-isopropylmalate dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=leuB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.199e-20 Identity = 63/156 (40.38%), Postives = 94/156 (60.26%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAE-KYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGI----ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + K N+M K+ L+ V E + KY ++ E ++ D M LV+ P FDV+V NL+GD++SD+ A L G LG+ PS ++G +G AL E VHGSAPDIAGK +ANP A++ S LR+ + +AD ++ AI + + +G RT D+ Sbjct: 191 MEKRNVM-KSGVLWNQVVTETHKAKYSDVQLEHMLADAGGMQLVRQPKQFDVIVTDNLFGDMLSDVAAMLTGSLGMLPSASLGAPDGKTGKRKALYEPVHGSAPDIAGKGIANPIAMIASFAMCLRYSFNMVKEADDLEKAIANVLDKG-IRTGDI 344
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAAW (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain MW2) GN=icd PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-19 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 312 SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 683 + +E AEK +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++++LSSV ML HL + AD+I ++I TIA Sbjct: 266 NAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIA 390
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAAS (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain MSSA476) GN=icd PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-19 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 312 SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 683 + +E AEK +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++++LSSV ML HL + AD+I ++I TIA Sbjct: 266 NAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIA 390
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAAN (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain N315) GN=icd PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-19 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 312 SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 683 + +E AEK +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++++LSSV ML HL + AD+I ++I TIA Sbjct: 266 NAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIA 390
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAAM (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=icd PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-19 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 312 SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 683 + +E AEK +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++++LSSV ML HL + AD+I ++I TIA Sbjct: 266 NAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIA 390 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |