CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_LACLA (3-isopropylmalate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=leuB PE=3 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32 Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + K N++ T L+ + E+A++YP++ E ++D+C M+L+ NP FDV+V NL+GDI+SD + L G LG+ PS + G G+AL E +HGSAPDIAGK +ANP +++LS MLR D A I+ A+ T +G T DLGG++TT + T+AI Sbjct: 181 VDKQNVLA-TSKLWRKMADEIADEYPDVRLEHQLVDSCAMLLITNPQQFDVIVTENLFGDILSDEASSLAGSLGVMPSSSHGFNGLALYEPIHGSAPDIAGKGIANPVSMILSIAMMLRESFGQEDGAAMIEKAVTQTFTDG-ILTKDLGGTATTKEMTEAI 340
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_ZYMMO (3-isopropylmalate dehydrogenase OS=Zymomonas mobilis GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31 Identity = 74/162 (45.68%), Postives = 104/162 (64.20%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 I K+N+++ T L+ +V E+A++YP++ + +DN M LV+ P FDV+V NL+GDI+SDL + +G +GL PS ++ G L E +HGSAPDIAG ANP A +LS MLR+ L+ ADRI+ A+ ST E RTADLGG TTS+ A+ Sbjct: 185 IDKSNVLE-TSQLWRTVVLEIAQEYPDVELSHMYVDNAAMQLVRAPDQFDVIVTGNLFGDILSDLASACVGSIGLLPSASLNSEGKGLYEPIHGSAPDIAGLGKANPLATILSGAMMLRYSLKREADADRIEKAV-STALEKGARTADLGGKMTTSEMGNAV 344
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACHD (3-isopropylmalate dehydrogenase OS=Bacillus halodurans GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31 Identity = 71/164 (43.29%), Postives = 107/164 (65.24%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 + KAN+++ + ++ V EVA+++PE+T E +++DN M L++ P FDVLV NL+GDI+SD + + G LG+ PS ++ G L E +HGSAPDIAGK +ANP A + S ML++ LH++A I++AI + + +G YRTAD+ S TKAI D Sbjct: 189 VDKANVLESSR-MWREVANEVAQEFPEVTLEHMLVDNAAMQLIRRPKQFDVLVTENLFGDILSDEASMVTGSLGMLPSASLTSDGPGLYEPIHGSAPDIAGKGVANPLATIASCAMMLKYSFGLHEEAKTIEDAIEAVLKQG-YRTADIAKPGEESSSTKAITD 350
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_PASMU (3-isopropylmalate dehydrogenase OS=Pasteurella multocida GN=leuB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31 Identity = 73/153 (47.71%), Postives = 101/153 (66.01%), Query Frame = -2 Query: 273 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 728 + KAN++ + L+ V +VA+ YPE+T + + IDN M L+K P FDVL+ N++GDIISD CA + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLRH L+D A I+NA+ + +AEG +RTADL S Sbjct: 192 VDKANVLISSV-LWREVVCDVAKDYPEVTLDHIYIDNATMQLIKQPEFFDVLLCSNIFGDIISDECAMITGSMGMLPSASLNEKGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRHSFNLNDAATAIENAVKNVLAEG-HRTADLADES 342
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_HAEIN (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae GN=leuB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31 Identity = 71/154 (46.10%), Postives = 102/154 (66.23%), Query Frame = -2 Query: 270 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 728 + KAN++Q + L+ E+A+ YPE+T E + IDN M L+K+P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLR+ L++ AD I++A+ +A G +RTADL ST Sbjct: 192 VDKANVLQSSI-LWRETVTEMAKDYPEVTLEHIYIDNATMQLIKSPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASG-HRTADLADDST 343
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACHK (3-isopropylmalate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=leuB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31 Identity = 73/166 (43.98%), Postives = 107/166 (64.46%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 I KAN+++ + L+ +V EVA +YP++ E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ AI + + GK TAD+GG+ TT+ FTKA+ + Sbjct: 181 IDKANVLESSK-LWRTVTEEVALRYPDVELEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TADIGGAETTTSFTKAVMQEM 344
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_SULSO (3-isopropylmalate dehydrogenase OS=Sulfolobus solfataricus GN=leuB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31 Identity = 74/172 (43.02%), Postives = 106/172 (61.63%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADR-------IQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 +HKAN+M+ TDGLF SVCRE+ + ++ +EE+ +D LV++P FDV+V N+YGDI+SD + + G LGL PS NIG+ ++ E VHG+A DIAGK +ANPTA LLS ML + K ++ ++NAI+ T G T D+GGS+ D I ++ Sbjct: 168 VHKANVMRVTDGLFASVCREILKG--KVNFEEMYVDAAAANLVRDPTRFDVIVTSNVYGDILSDEASQIAGSLGLAPSANIGDRK-SMFEPVHGAAFDIAGKGIANPTAFLLSVSMMLSRMYELSKENKYILASKSLENAIIETYKSGNKLTEDVGGSAKLKDMVDEIYKYM 336
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_HAEI8 (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=leuB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31 Identity = 71/154 (46.10%), Postives = 101/154 (65.58%), Query Frame = -2 Query: 270 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 728 + KAN++Q + L+ E+A+ YPE+T E + IDN M L+K P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLR+ L++ AD I++A+ +A G +RTADL ST Sbjct: 192 VDKANVLQSSI-LWRETVTEMAKDYPEVTLEHIYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEAGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASG-HRTADLADDST 343
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: AKSF_METJA (Homoisocitrate dehydrogenase OS=Methanocaldococcus jannaschii GN=aksF PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31 Identity = 74/165 (44.85%), Postives = 104/165 (63.03%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 IHKAN+++ TDGLF V E+ + Y I ++ ++D+ M L+K+P FDV+V N++GDI+SD + LIGGLGL PS NIG+ AL E VHGSAPDIAGK +ANP A +LS + ++ +K D I+ A+ + K T DLGG T D I +++ Sbjct: 179 IHKANVLRITDGLFLEVFNEIKKHY-NIEADDYLVDSTAMNLIKHPEKFDVIVTTNMFGDILSDEASALIGGLGLAPSANIGDDK-ALFEPVHGSAPDIAGKGIANPMASILSIAMLFDYIGEKEKGDLIREAVKYCLINKKV-TPDLGGDLKTKDVGDEILNYI 340
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACCR (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=leuB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.331e-30 Identity = 72/166 (43.37%), Postives = 106/166 (63.86%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 I KAN+++ + L+ +V EVA +YP + E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ A+ + + GK TAD+GG+ TT+ FTKA+ + Sbjct: 181 IDKANVLESSK-LWRTVTEEVALRYPNVEVEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGYAIEEAVSAVLKSGKC-TADIGGTETTTSFTKAVIQEM 344 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |