CX296795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.168e-11 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 150 ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 29 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 65.4698 bits (158), Expect = 9.888e-11 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 1 Query: 157 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 294 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGK Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 48
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.797e-11 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153 ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 29 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77 HSP 2 Score: 65.4698 bits (158), Expect = 9.888e-11 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 1 Query: 157 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 294 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGK Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 48
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.571e-11 Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 150 ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 29 RVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.571e-11 Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 150 ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 29 RVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.571e-11 Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 150 ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 29 RVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.571e-11 Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 150 ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 29 RVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX296795 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.571e-11 Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 7 KLQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 150 ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 29 RVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 The following BLAST results are available for this feature:
BLAST of CX296795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296795 ID=CX296795; Name=CX296795; organism=Citrus clementina; type=EST; length=296bpback to top |