CX296803

Overview
NameCX296803
Unique NameCX296803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLB1L_HUMAN (Beta-galactosidase-1-like protein OS=Homo sapiens GN=GLB1L PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 85/216 (39.35%), Postives = 120/216 (55.56%), Query Frame = 1
Query:    4 ERIILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            E+I+L+TTDG   E L  G++RG  ++  VDF        IF L +++   G  P ++SE+YTGWL +WG+  +          LE +L    S  +YM HGGTNFG++NGA   + +  + P  TSYDYDAPI E+GD   PK  A+R V+ KF    L  + P + K   GP+ L     L   LD+L P   + S  P++ E+V Q  GF+LY
Sbjct:  211 EKILLFTTDGP--EGLKCGSLRG--LYTTVDFGPADNMTKIFTLLRKYEPHG--PLVNSEYYTGWLDYWGQNHSTRSVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGA---DKKGRFLPITTSYDYDAPISEAGD-PTPKLFALRDVISKFQEVPLGPLPPPSPKMMLGPVTLHLVGHLLAFLDLLCPRGPIHSILPMTFEAVKQDHGFMLY 416          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLB1L_MACFA (Beta-galactosidase-1-like protein OS=Macaca fascicularis GN=GLB1L PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33
Identity = 83/216 (38.43%), Postives = 120/216 (55.56%), Query Frame = 1
Query:    4 ERIILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            E+I+L+TTDG   E L  G+++G  ++  VDF        IF L +++   G  P ++SE+YTGWL +WG+  +          LE +L    S  +YM HGGTNFG++NGA   + +  +    TSYDYDAPI E+GD   PK  A+R V+ KF    L  + P + K   GP+ L     L   LD+L P+  + S  P++ E+V Q  GF+LY
Sbjct:  211 EKILLFTTDGP--EGLKCGSLQG--LYTTVDFGPADNMTKIFTLLRKYEPHG--PLVNSEYYTGWLDYWGQNHSTRSVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGA---DKKGRFLSITTSYDYDAPISEAGD-PTPKLFALRDVISKFQEVPLGPLPPPSPKMMVGPLTLHLVGHLLAFLDLLCPSGPIRSILPMTFEAVKQDRGFMLY 416          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL1_DICDI (Beta-galactosidase 1 OS=Dictyostelium discoideum GN=glb1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.328e-32
Identity = 82/225 (36.44%), Postives = 132/225 (58.67%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGA--EAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGE-KIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKF------SPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDML--DPADVVESENPLSMESVGQMFGFLLY 651
            ++ ++TDG + + L    + G  V+  VDF      +    FK+Q+ F A   +PP++SE+YTGW+T+WG+   A+TDA   A  L+ ILS N S  +YM  GG+N GF NGAN+ +  ++++  + SYDYD+P+ ESGD    K+ AI+ V+EK+      S ++LP +  ++ K  +G IQ+ +   LF+ L  L       +++  P+ ME + Q  GF+LY
Sbjct:  232 VLFHSTDGPSAQMLFGSKLEG--VYQTVDFGPMPIEQIQDNFKIQQTF-ASKPTPPMNSEYYTGWITNWGDASAARTDASVVAQGLDDILSLNASVNMYMFFGGSNAGFMNGANSNSPTTNFEITIQSYDYDSPLSESGDT-TEKYFAIKNVIEKYIKPTTNSNSTLPPIPSNSTKVAYGTIQITQATSLFNNLANLVNSNQQQLQTGAPIPMEQLQQSTGFVLY 452          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_XANMN (Beta-galactosidase OS=Xanthomonas manihotis GN=bga PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 80/228 (35.09%), Postives = 115/228 (50.44%), Query Frame = 1
Query:    1 WERIILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESD-YQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYG 681
            +++ +L+T+DG   + L  GT+      A V+F+ G EA   F    +F      P +  E++ GW  HWG+  A TDA   A   E IL Q  SA LYM  GGT+FGF NGAN  N+ SD Y P  TSYDYDA + E+G    PKF  +R  + + +    P++             L+++A L+D L        +  + P  ME  GQ +G++LY +   G   G
Sbjct:  207 FDKALLFTSDGA--DMLANGTLPD--TLAVVNFAPG-EAKSAFDKLIKFRPD--QPRMVGEYWAGWFDHWGKPHAATDARQQAEEFEWILRQGHSANLYMFIGGTSFGFMNGANFQNNPSDHYAPQTTSYDYDAILDEAGH-PTPKFALMRDAIARVTGVQPPALPAPITTTTLPATPLRESASLWDNL-----PTPIAIDTPQPMEQFGQDYGYILYRTTITGPRKG 421          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLBL2_HUMAN (Beta-galactosidase-1-like protein 2 OS=Homo sapiens GN=GLB1L2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 72/219 (32.88%), Postives = 107/219 (48.86%), Query Frame = 1
Query:   13 ILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESV------GQMFGFLLY 651
            +L T+D   ++ L KG ++G  V A ++  +  E   +      FN  G  P +  E++TGW   WG      D+      +  I+    S  LYM HGGTNFGF NGA   +   DY+ D+TSYDYDA + E+GD    K+  +R      S   LP       K  + P+       L+D L  L   + ++SE P++ME++      GQ FG++LY
Sbjct:  227 LLLTSDN--KDGLSKGIVQG--VLATINLQSTHELQLLTTFL--FNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFH---DYKSDVTSYDYDAVLTEAGDY-TAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYL--GEPIKSEKPINMENLPVNGGNGQSFGYILY 433          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLBL2_MOUSE (Beta-galactosidase-1-like protein 2 OS=Mus musculus GN=Glb1l2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 70/219 (31.96%), Postives = 105/219 (47.95%), Query Frame = 1
Query:   13 ILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESV------GQMFGFLLY 651
            +L T+D   ++ L KG +  D V A ++  +  E   +  +    +  G  P +  E++TGW   WG      D+      +  I+    S  LYM HGGTNFGF NGA   N   DY+ D+TSYDYDA + E+GD    K+  +R +    S    P       K  + P+       L+D +  +D    V SE P++ME++      GQ FG++LY
Sbjct:  227 MLLTSDN--KDGLEKGVV--DGVLATINLQSQQELMALNTVL--LSIQGIQPKMVMEYWTGWFDSWGGSHNILDSSEVLQTVSAIIKDGSSINLYMFHGGTNFGFINGAMHFN---DYKADVTSYDYDAILTEAGDY-TAKYTKLRELFGTVSGIPPPPPPELTAKMVYEPMSPALYLSLWDAIQYMDKP--VTSETPINMENLPVNNGNGQAFGYVLY 433          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLBL3_MOUSE (Beta-galactosidase-1-like protein 3 OS=Mus musculus GN=Glb1l3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18
Identity = 72/232 (31.03%), Postives = 111/232 (47.84%), Query Frame = 1
Query:   13 ILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESV------GQMFGFLLYVSEF--GGKDYGS 684
            +L T+D   ++ +  G++ G      ++  T      + K+Q         P +  E++TGW   WG K  +  A+     + K +S   S  +YM HGGTNFGF NG   G  E+ +   +TSYDYDA + E+GD     FK +R++    S   LP + P   KA +  + L     LFD+L  L+    V    P++ME++      GQ FG +LY +    GG  + S
Sbjct:  229 LLLTSDD--KDGIQIGSVNGALTTINMNSFTKDSFIKLHKMQSD------KPIMIMEYWTGWYDSWGSKHIEKSAEEIRHTVYKFISYGLSFNMYMFHGGTNFGFING---GRYENHHISVVTSYDYDAVLSEAGDYTEKYFK-LRKLFASGSARPLPPLPPLIPKAIYPSVNLSFYLPLFDILPYLN--QPVMLHTPVTMENLPINNGSGQPFGLVLYETSICSGGSLFAS 446          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLBL3_RAT (Beta-galactosidase-1-like protein 3 OS=Rattus norvegicus GN=Glb1l3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18
Identity = 63/176 (35.80%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  166 PPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESV------GQMFGFLLYVSE--FGG 669
            P +  E++TGW   WG K  +  A+     + +  S   S  +YM HGGTNFGF NG   G  E+ +   +TSYDYDA + E+GD     FK +R++    S   LP +     KA +  + L     LFD+L  L+    V  E P++ME++      GQ FG +LY +   FGG
Sbjct:  272 PIMIMEYWTGWYDSWGSKHTEKSANEIRRTIYRFFSYGLSFNVYMFHGGTNFGFING---GYHENGHTNVVTSYDYDAVLSEAGDYTEKYFK-LRKLFASGSARPLPPLPRLIPKAVYPSVNLSFYLPLFDILPYLNKP--VMLETPVTMENLPINNGSGQPFGLVLYETSICFGG 441          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLBL3_HUMAN (Beta-galactosidase-1-like protein 3 OS=Homo sapiens GN=GLB1L3 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17
Identity = 72/224 (32.14%), Postives = 108/224 (48.21%), Query Frame = 1
Query:   13 ILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKL-QKQFNAPGK----SPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESV------GQMFGFLLY 651
            +L T+DG   + ++ G  +G  V AA++           KL Q  FN   K     P L  E++ GW   WG+K    DA      + + +    S  +YM HGGTNFGF NGA      S     +TSYDYDA + E+GD    K+  ++++ +  S   LP V     KA + P++      L+D L  L+  + V S  P++ME++      GQ +G +LY
Sbjct:  253 LLLTSDG--EKHVLSGHTKG--VLAAINLQ---------KLHQDTFNQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHSGI---VTSYDYDAVLTEAGDY-TEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYLN--EPVRSRQPVNMENLPINNGSGQSYGLVLY 457          
The following BLAST results are available for this feature:
BLAST of CX296803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GLB1L_HUMAN8.318e-3539.35Beta-galactosidase-1-like protein OS=Homo sapiens ... [more]
GLB1L_MACFA3.495e-3338.43Beta-galactosidase-1-like protein OS=Macaca fascic... [more]
BGAL1_DICDI1.328e-3236.44Beta-galactosidase 1 OS=Dictyostelium discoideum G... [more]
BGAL_XANMN1.019e-2435.09Beta-galactosidase OS=Xanthomonas manihotis GN=bga... [more]
GLBL2_HUMAN6.836e-2132.88Beta-galactosidase-1-like protein 2 OS=Homo sapien... [more]
GLBL2_MOUSE5.787e-2031.96Beta-galactosidase-1-like protein 2 OS=Mus musculu... [more]
GLBL3_MOUSE1.091e-1831.03Beta-galactosidase-1-like protein 3 OS=Mus musculu... [more]
GLBL3_RAT5.417e-1835.80Beta-galactosidase-1-like protein 3 OS=Rattus norv... [more]
GLBL3_HUMAN1.576e-1732.14Beta-galactosidase-1-like protein 3 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionC05803A04SK FerrChloL1 Citrus clementina cDNA clone C05803A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296803 ID=CX296803; Name=CX296803; organism=Citrus clementina; type=EST; length=696bp
TGGGAAAGAATAATTTTGTATACTACAGATGGAGGTACAAGGGAAACTCT
TATGAAAGGAACCATCCGTGGAGACGCCGTCTTTGCAGCTGTTGACTTCT
CAACGGGTGCTGAGGCATGGCCTATATTTAAGTTACAAAAGCAGTTCAAT
GCACCAGGAAAGTCACCACCGCTTTCTTCGGAATTTTATACAGGTTGGCT
TACACACTGGGGAGAGAAGATTGCGAAGACGGATGCTGATTTTACCGCAT
CTTATCTAGAGAAGATTTTGTCACAAAATGGTTCTGCTGTGCTTTATATG
GCACATGGTGGGACAAACTTTGGATTTTACAACGGAGCAAATACTGGTAA
CAGTGAGTCTGATTACCAGCCAGATCTCACTTCCTATGATTATGATGCAC
CAATTAAGGAATCTGGTGATGTTGATAACCCAAAGTTCAAAGCAATCAGG
AGGGTGGTAGAGAAATTTAGTCCAGCATCTCTTCCTTCTGTTCTTCCTGA
TAATGAGAAGGCAGGATTTGGACCTATTCAGTTACAGAAAACAGCATTGT
TATTTGACTTACTCGACATGCTAGATCCTGCAGATGTAGTTGAATCTGAA
AACCCACTTTCAATGGAGTCTGTGGGTCAGATGTTTGGATTTCTATTGTA
TGTTTCTGAATTTGGTGGAAAGGACTATGGAAGCAGTCTTCTTATA
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