CX296804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21 Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 285 + ++PLD DL+ +LANEHEILIT+EEGS+GGFG+HV L G LDG +K+R+MVLPD ++DH +P +GL ++ I V LG+ +A Sbjct: 538 RFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDGEVKMRAMVLPDVFLDHDTPTAMYANAGLDAKAIVKKVFEALGKEHKA 632
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 279 + ++PLD +L+ +LA EHE+LITVEEGS+GGFGSHV L G+LDG +++RS+VLPD ++DH +PA +GL ++ I V LG+ K Sbjct: 541 RFMKPLDVELVLKLAREHEVLITVEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPAVMYARAGLDAKGIVKKVFEALGKDK 633
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHIL3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxs PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21 Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DLIRQLA HE++ITVEEGS+GGFGSHV HFL G+LD LKLRS+V+PD +++ P +GL I +TV LGR Sbjct: 540 RFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BRAJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum GN=dxs PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + ++PLDT+L+ +LA +HEILIT+EEGSVGGFGSHV FLT G LD G +K R+MVLPD + DH +PA +GL ++ I A V LG+ Sbjct: 560 RFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMVKFRTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.458e-21 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD DLI LA++HE LIT+EEG+VGGFGSHV L G+ D LK RSMVLPD +ID SPAD +G+++ I A VL +LG Sbjct: 544 RFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLG 633
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DL+R+LA EHE+L+T+EEG++GGFG+H+ FL G+L+ LK+R++ PD Y++HGSP L GL + I TVL+++GR Sbjct: 540 RFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTVVGR 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD D+I LA +HE LIT+EEG+VGGFGSHV L+ + D LK RSMVLPD +ID SP D + + +++ HI A VL +LG Sbjct: 544 RFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVLG 633
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 539 RFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 539 RFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BRUO2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 539 RFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629 The following BLAST results are available for this feature:
BLAST of CX296804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296804 ID=CX296804; Name=CX296804; organism=Citrus clementina; type=EST; length=523bpback to top |