CX296804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.641e-19 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD DL+R+LA EHE+ IT+EEG++GGFG+HV FL +L+ LK+R++ LPD Y++HGSP L GL ++ I V + LG Sbjct: 540 RFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALLEHGLKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSLG 629
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_AGRRK (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dxs PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19 Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DLIRQLA+ HE+LIT+EEGSVGGFGS V FL G+LD LK+R++V+PD +++ P +GL I TV LGR Sbjct: 540 RFAKPLDHDLIRQLASHHEVLITIEEGSVGGFGSQVMQFLASEGLLDNGLKIRTLVMPDIWVEQAKPEVMNAMAGLDRAGIVQTVFKALGR 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.916e-19 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + +P+D +LI LA H L+ VEEGSVGGFGS V FL+ G++DG LK+R++ LPD YIDH +PA QL E+GL + I L+L+ Sbjct: 539 RFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDGGLKVRALTLPDTYIDHDTPAAQLAEAGLDADGIYKRALALV 627
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.916e-19 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 10 QPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 +PLDT LI QL H L+TVE+G++GGFG+HV H+L SG DG L LR M LPDR+I+ SP D ++GL + I+AT L R Sbjct: 546 RPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALAR 633
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.034e-18 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 285 + +PLD DLIR+LA HE+L+TVEEG++GGF SHV FL G+L+ LK+R +VLPD + DH P ++GL + I TV + L A Sbjct: 540 RFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLKVRPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.034e-18 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + +PLD LIRQL H++++TVEEGS+GG G+HV + G++DG LK+R+M LPD + DH +P Q +E+GL++ HI TVL L Sbjct: 540 RFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.350e-18 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + ++PLD DL+ +LA +H++LIT+EEGS+GGFGSHV L G LD G +++R+MVLPD ++DH +P GL R I A V LG+ Sbjct: 567 RFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.350e-18 Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD ++I L HE LITVEEG++GGFGSHV L+ G+ D K RSMVLPD +ID SPAD +G+++ I VLS+LG Sbjct: 544 RFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS1_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.350e-18 Identity = 41/89 (46.07%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + L+P D +L+ LA HE+LI VEEG++GGFG+HV +LT G+LDG LKLR++ +PDR+ +H +P Q ++G+ ++ I+ VL L Sbjct: 542 RFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.008e-18 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD DLIRQ A HE++ITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV LGR Sbjct: 540 RFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630 The following BLAST results are available for this feature:
BLAST of CX296804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296804 ID=CX296804; Name=CX296804; organism=Citrus clementina; type=EST; length=523bpback to top |