CX296804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.752e-18 Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 279 + +PLD +L+ +LA H L+TVEEGSVGGFGSHV +T G+LD G +K+R+MVLPD YID + A QL +GL + I A V LLG+ K Sbjct: 541 RFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAK 634
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_PELUB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelagibacter ubique GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.143e-17 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + +PLD +LI + A EHE +ITVEEGS+GGFGSHV + L+ GI D LK R+M+LPD +I+ SP + +GL++ IS +L +L Sbjct: 538 RFAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL 626
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.143e-17 Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD DLI QLA HE LIT+EEG++GGFGSHV L +G+ D + RSMVLPD +IDH S +GL++ I L LG Sbjct: 540 RFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.493e-17 Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + +PLDT+LI QL HE+++T+EE S+GG G+HV + + G+ D LK+R+M LPD +I+ +P Q +E+GL++ HI TVL L Sbjct: 540 RFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKAL 628
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.950e-17 Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD +L+RQLA HE+LITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV L R Sbjct: 540 RFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALRR 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.547e-17 Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + L+P D +L+ LA HE+LI VEEG++GGF SHV +L G+LDG LKLR++ +PDR+ +H +P Q ++G+ ++ I+ VL L Sbjct: 542 RFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 288 + +PLD +I+ L HE+ +T+EEG++GG G+HV + G++DG LKLR+M LPD + +H P Q E+GL + I ATVL+ L R + L Sbjct: 540 RFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGL 635
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.156e-16 Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +P+D L+ LA +HE+ IT+EEG++GGF S V L +G+LD +K R M LPDRYIDH + Q E++GL++ HI T LG Sbjct: 564 RFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLD-KVKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 652
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.677e-16 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 294 + +PLDTDLI +L H LIT+E+G++GGFG+ V H+L +G L+ +R+M LPD YIDHGSP + +GL++ I T L+ RP +++ I Sbjct: 541 RFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTALA-AARPSKSVRI 637
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_PHEZH (1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium zucineum (strain HLK1) GN=dxs PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.070e-15 Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD DL+ +LA EHE LITVEEG+VGGFG V H L G LD LK+R++ LPD + D P ++GL + I L+ LG Sbjct: 538 RFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLKIRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAALG 627 The following BLAST results are available for this feature:
BLAST of CX296804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296804 ID=CX296804; Name=CX296804; organism=Citrus clementina; type=EST; length=523bpback to top |