CX296804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLDT LI L +H LITVE+G+V GFG V H L +G LDG +R++ LPDR+ID SPA+ ++GL++ I+ L +G Sbjct: 539 RFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAMG 628
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.545e-14 Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD D++ +LA EHE +ITVEEG++GGFG+ V L G LD LK+R++VLPD + D P ++GL + I LS LG Sbjct: 538 RFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.635e-14 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD DL+ +LA EHE +ITVEEGS+GGFG+ V L G LD LK+R++ LPD + D P ++GL + I LS +G Sbjct: 538 RFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.635e-14 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +PLD DL+ +LA EHE +ITVEEGS+GGFG+ V L G LD LK+R++ LPD + D P ++GL + I LS +G Sbjct: 538 RFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.442e-14 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 267 + +PLD +LIR+ HE+ +TVEEGS+GG G+HV + G++D LKLR++ LPD + D P Q + +GL++ I TVL L Sbjct: 540 RFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKAL 628
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.495e-14 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD LI L H+ LITVE+G++ GFG+ V + G+LD K+R+M LPDR+ID +PA+ ++GL + I V +LGR Sbjct: 543 RFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIVEQVTRVLGR 633
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.446e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + +PLD L RQL H+++IT+EEG++GGF + V + G++D LK+R++ LPDR+ Q E+GL + I A V+S L R Sbjct: 540 RFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHR 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.467e-12 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 228 + ++PLD LIR+LA+ H++L+TVEE +V GG GS V +L +G LD P +R + LPDR++DHG+PA+ L E GL Sbjct: 534 RFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAG-LDVP--VRHLGLPDRFVDHGTPAELLAEVGL 607
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.221e-12 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLGR 273 + ++PLD L+R+LA HE+L+TVEE S+ GG GS V FL G+L L L LPD Y++H P++ L E GL + I V L+ LG+ Sbjct: 540 RFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVLRPILHLG---LPDYYVEHAKPSEMLAECGLDAAGIEVAVRKRLAALGK 631
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RALEJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia eutropha (strain JMP134) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + ++PLD +L+++LA EH L+TVEEGSV GG GS V L +GI D P+ + + LPDR+IDHG PA L + GL + I +V G Sbjct: 538 RFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAVLEALAEAGI-DIPVLV--LGLPDRFIDHGDPALLLSQCGLDAAGIERSVRERFG 625 The following BLAST results are available for this feature:
BLAST of CX296804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296804 ID=CX296804; Name=CX296804; organism=Citrus clementina; type=EST; length=523bpback to top |