CX296809

Overview
NameCX296809
Unique NameCX296809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.075e-15
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEM--VDLSES 362
            +P  +++D  I GY IPK + + ++   + RNPNVWKDP  FIPER +       +Q++       FL F  GRR C G+ +G  +  + L  LL  F+W  P   E+  VDL ES
Sbjct:  366 IPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM------DNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEES 475          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.377e-14
Identity = 48/136 (35.29%), Postives = 64/136 (47.06%), Query Frame = 3
Query:   24 PHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLY 431
            P   T D TI GY I KG+ ++ +   + R+P+VW DPL+F PER + +    H  V++       L F  GRR C GM+LG  M   +LA  L  F    PS E +      +     A PL    KP L    Y
Sbjct:  410 PREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLST----HKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVLVKPCLSFKCY 541          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14
Identity = 41/139 (29.50%), Postives = 76/139 (54.68%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSES-KCDLLMAKPLHARAKPRLPADLY 431
            NLP ++++   + G++IPKG+ + ++   +GR+P++W++P +F P+R +   +  + +++    +   + F  GRR C G  LG  +   +L  L+  F+W  PS    +++ E     L  A PL A   PRLP  +Y
Sbjct:  373 NLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFL---ERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVIELNMDEPFGLALQKAVPLAAMVTPRLPLHIY 508          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.008e-14
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPS--DEEMVDLSES 362
            +P  +++   I GY IPK + + ++   + RNPNVWKDP  FIPER +      H +++    +   L F  GRR C GM LG  +  + L  LL  F+W  P   + E VDL ES
Sbjct:  366 IPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERFM------HSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEES 475          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.008e-14
Identity = 47/137 (34.31%), Postives = 66/137 (48.18%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLS-ESKCDLLMAKPLHARAKPRLPADL 428
            LP     D  I GY IPK +H+ +S   +GR+P  W +P +F PER   +  ++  Q          L F  GRR C GM LG  +  + L  +L  F+WS P+   + D+  E    L +AK +     P LPA L
Sbjct:  373 LPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQ------HYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELIPTLPASL 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C508D_DICDI (Probable cytochrome P450 508D1 OS=Dictyostelium discoideum GN=cyp508d1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.008e-14
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVD 350
            LPH + +D  + G+FIPK S VL++   LGRNP  + DPLKF P R IGS  D             F+ F  G R C+G ALG +   +LL+ +   F  ++ + +++ D
Sbjct:  364 LPHTTDQDIIVKGHFIPKDSMVLINFYSLGRNPKDFPDPLKFDPNRFIGSTPD------------SFMPFGTGPRNCIGQALGMDQIYLLLSNIFLNFKITSENGKKLDD 461          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.234e-14
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVW-KDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRL 416
            LPH S    T+ GY+IPK + V+++   +GR+P+VW  D  +F PER +  ++++   +   +++ R L F  GRR C G A+        LA+LL  F+W    D   +D+ E+ C   M +     A PRL
Sbjct:  389 LPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFM-QMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEGDPSELDMKEA-CATKMPRQTPLLAYPRL 519          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.234e-14
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEE 341
            LPH ST D  I GY IP    VL++   +GR+P VW+ P +F+PER +   D        +  + R+L F  GRR C G   G     ++LA L+  F+W  P+++E
Sbjct:  401 LPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMR--DGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKE 505          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.234e-14
Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDL 353
            LP L+  D  I GY IPK + + ++   +GR+P  WK P +FIPER + S  D+  Q          L F  GRR C GMA G  M  + L  LL  F+WS P+   + D+
Sbjct:  371 LPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQ------HFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDI 475          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.836e-14
Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPRL 416
            +PH++  DA + GY IP  S +L++   L  NP+ WK P +F PER +    +   +VE    + R+L F  GRR C G+ L   +  + + RL+Q F    P  ++ VD +E   +  L + K     AKPR+
Sbjct:  375 VPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFL----EEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVAKPRV 504          
The following BLAST results are available for this feature:
BLAST of CX296809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
C71BB_ARATH8.075e-1537.93Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA1.377e-1435.29Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C75A5_EUSGR2.350e-1429.50Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BE_ARATH4.008e-1437.93Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH4.008e-1434.31Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C508D_DICDI4.008e-1437.27Probable cytochrome P450 508D1 OS=Dictyostelium di... [more]
C75A1_PINTA5.234e-1433.83Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71C3_MAIZE5.234e-1437.38Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71BZ_ARATH5.234e-1438.74Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ZINEL6.836e-1433.58Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]

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Properties
Property NameValue
Genbank descriptionC05803A12SK FerrChloL1 Citrus clementina cDNA clone C05803A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296809 ID=CX296809; Name=CX296809; organism=Citrus clementina; type=EST; length=560bp
CCGAATTCGGCACGAGGAACCTGCCTCATCTTTCAACTCGCGATGCCACT
ATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAGCCGAAT
AGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAATTCATAC
CTGAACGTCATATTGGTTCAGTGGACGATCATCATCATCAAGTAGAGTTG
GCGGAAACAGAATTACGATTCCTTTCATTCAGCAGAGGAAGACGCGGTTG
CATGGGCATGGCACTTGGGTCCGAGATGTCTGTAATGCTTTTGGCAAGGC
TTCTTCAAGGTTTTAATTGGAGCACGCCATCGGATGAGGAGATGGTTGAC
CTTTCCGAGTCAAAATGCGACCTCCTAATGGCTAAGCCACTGCATGCTCG
TGCAAAGCCCCGCTTGCCTGCTGATTTATACCCAGCTAATAATTAAATGA
TGTTAACCGTTCTTTATGTTATCTTCATTCTTTAATTTAATGTAATTCTT
CATTATCTCACGATTTATCTATCTTGAACGCTTTGCCATCTCGAAAAGGG
GGGGCCCGGT
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