CX296809

Overview
NameCX296809
Unique NameCX296809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13
Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPR 413
            +PH++  DA + G+ IP  S +L++   L  NP+ WK P +F PER +    +   +VE    + R+L F  GRR C G+ L   +  + + RL+Q F    P  +  +D  E   +  L + K     AKPR
Sbjct:  375 VPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFL----EEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13
Identity = 45/133 (33.83%), Postives = 66/133 (49.62%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPR 413
            +PH++  DA + GY IP  S +L++   L  NP  WK P +F PER +    +    VE    + R+L F  GRR C G+ L   +  + L RL+Q F    P  +  +D +E   +  L + K     AKPR
Sbjct:  375 VPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFL----EEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLS 356
            LP  +  D  I GY IPK + + ++   +GR+PN W +P +FIPER + S  D+  Q          L F  GRR C GMA G  +  + L  +L  F+WS P    + D++
Sbjct:  371 LPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQ------HFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADIN 476          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.684e-12
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE 359
            +PH++  DA ++G+ IP  S +L++   L  NP  WK P +F PER +    +    VE    + R+L F  GRR C G+ L   +  + L RL+Q F    P  +  +D +E
Sbjct:  374 VPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFL----EEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAE 482          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12
Identity = 42/135 (31.11%), Postives = 65/135 (48.15%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDL-SESKCDLLMAK--PLHARAKPRL 416
            LP  +    TI  Y IPK   ++++  G+GR+P  W DPL F PER + S       V+    +   + F  GRR C G+ + ++   +L+A  +Q  +W  P+   +  L  E K  L + K  PL    K R+
Sbjct:  359 LPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNS------SVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSRV 487          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12
Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPS--DEEMVDLSES-KCDLLMAKPLHA 398
            +P  +  D  + G+ +PK + V ++   +GR+PNVW++  +F PER +G        ++L   +     F  GRR C G+ L  +   ++LA LL  F+W  P+    E +D+ E+    L    PLHA
Sbjct:  381 VPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGK------DIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHA 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSD--EEMVDLSES 362
            +P  + +D    GY IPKG+ VL++   +GR+P  W +P +F PER + S      +V++       + F  GRR C+G+ LG  M       LL  F+W  P +   + +++ ES
Sbjct:  340 IPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLES------KVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEES 449          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 51/134 (38.06%), Postives = 66/134 (49.25%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIG-SVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLS-ESKCDLLMAKPLHARAKPRL 416
            LP  +  D  I GY IP+ + +L+S   LGR+P  WK+P +F PER I   VD   H  E       FL F  GRR C GMA       + L  LL  F+W  P  EEM D++ E   D+ + K +     P L
Sbjct:  375 LPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFE-------FLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLP--EEMKDMNMEESGDVTIVKKVPLELLPVL 499          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12
Identity = 42/135 (31.11%), Postives = 65/135 (48.15%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDL-SESKCDLLMAK--PLHARAKPRL 416
            LP  +    TI  Y IPK   ++++  G+GR+P  W DPL F PER + S       V+    +   + F  GRR C G+ + ++   +L+A  +Q  +W  P+   +  L  E K  L + K  PL    K R+
Sbjct:  360 LPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNS------SVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSRV 488          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12
Identity = 42/129 (32.56%), Postives = 66/129 (51.16%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSD--EEMVDLSES-KCDLLMAKPLHA 398
            +P  +  DA I G+ + K + VL++   +GR+P+VW +P +F PER +G        +++   +     F  GRR C GM L  +   ++LA LL  F+W  P     E +D+ E+    L    PLHA
Sbjct:  380 IPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGK------DMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHA 502          
The following BLAST results are available for this feature:
BLAST of CX296809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
TCMO_HELTU9.871e-1332.33Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_GLYEC9.871e-1333.83Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71BL_ARATH9.871e-1335.71Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
TCMO_CICAR1.684e-1233.63Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C80B1_ESCCA2.199e-1231.11(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C76C2_ARATH2.199e-1231.01Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME2.872e-1231.90Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C71BP_ARATH2.872e-1238.06Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C80B2_ESCCA3.751e-1231.11(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C76C1_ARATH3.751e-1232.56Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05803A12SK FerrChloL1 Citrus clementina cDNA clone C05803A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296809 ID=CX296809; Name=CX296809; organism=Citrus clementina; type=EST; length=560bp
CCGAATTCGGCACGAGGAACCTGCCTCATCTTTCAACTCGCGATGCCACT
ATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAGCCGAAT
AGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAATTCATAC
CTGAACGTCATATTGGTTCAGTGGACGATCATCATCATCAAGTAGAGTTG
GCGGAAACAGAATTACGATTCCTTTCATTCAGCAGAGGAAGACGCGGTTG
CATGGGCATGGCACTTGGGTCCGAGATGTCTGTAATGCTTTTGGCAAGGC
TTCTTCAAGGTTTTAATTGGAGCACGCCATCGGATGAGGAGATGGTTGAC
CTTTCCGAGTCAAAATGCGACCTCCTAATGGCTAAGCCACTGCATGCTCG
TGCAAAGCCCCGCTTGCCTGCTGATTTATACCCAGCTAATAATTAAATGA
TGTTAACCGTTCTTTATGTTATCTTCATTCTTTAATTTAATGTAATTCTT
CATTATCTCACGATTTATCTATCTTGAACGCTTTGCCATCTCGAAAAGGG
GGGGCCCGGT
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