CX296809

Overview
NameCX296809
Unique NameCX296809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12
Identity = 39/105 (37.14%), Postives = 53/105 (50.48%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSD 335
            +P  +  +  I GY I  G+ + ++   +GRNP+VWKDP +FIPER + S       VE   T    L F  GRRGC  M +G       LA LL  F+W    +
Sbjct:  376 IPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDS------NVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKATEE 474          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12
Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVW-KDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTP--SDEEMVDLSES 362
            +PH ST D  +  Y IP G+HV+++   +GR    W  D  +F PERH+ S  D+  Q    +TEL  + F  GRR C  ++    +  ++LA L+  F+W+ P  S E   D++ES
Sbjct:  362 VPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQ----DTEL--VPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAES 472          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE 359
            +PH++  DA +AGY IP  S +L++   L  NP  W  P +F PER +    +   +VE    + +++ F  GRR C G+ L   +  +++ RL+Q F    P  +  +D +E
Sbjct:  376 VPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFL----EEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAE 484          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 45/135 (33.33%), Postives = 64/135 (47.41%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDL-SESKCDLLMAKPLHARAKP-RLP 419
            LP  +     + GY IP    +L++   +GR+P +W DP +F PER I S  D+  Q          L F  GRR C GMA+G     + L  LL  F+W  P      D+ +E    L + K +H +  P R+P
Sbjct:  374 LPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQ------HFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVKKVHLKLVPVRVP 502          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 44/133 (33.08%), Postives = 63/133 (47.37%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLS-ESKCDLLMAKPLHARAKPRL 416
            LP L+  D  I GY IPK + + ++   +GR+P  W  P +FIPER +       + +E        L F  GRR C GMA G  +  + L  LL  F+WS P+     D+  E     ++AK +     P L
Sbjct:  369 LPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFV------DNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELVPTL 495          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLS-ESKCDLLMAKPLHARAKPRL 416
            +P ++ +D  IAGY +P+ + + ++   +  +P++WKDP  F PER I       +Q +        L F  GRR C GM +G  +  + L  LL  F+W  P+  +  +LS E    L+  K L   A P L
Sbjct:  366 VPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFI------DNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIPVL 492          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   33 STRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE 359
            S+R A + GY IP  + + ++   +GR+PN W++PL+F PER    V++   Q+++       L F  GRR C G +L  ++  + LA L+Q F W    D   V++ E
Sbjct:  379 SSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERF---VENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGKVNMEE 484          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 3
Query:   33 STRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE-SKCDLLMAKPLHARAKPRL 416
            S++ A + GY IP  + + ++   +GR+PN W+ P +F PER I    D  +Q+++      F+ F  GRR C G +L  ++  + LA ++Q F W        VD+ E S   L  A P+     PR+
Sbjct:  378 SSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFI---RDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGITLPRANPIICVPVPRI 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPS--DEEMVDLSE 359
            LPH S     +AGY IP  + V+++   LGR+   W+   +F+PER +    D    V+L   E +FL+F  GRR C G+   S     +L+ L+  F+W  P+    E VD++E
Sbjct:  407 LPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSG--DVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTE 519          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 45/135 (33.33%), Postives = 67/135 (49.63%), Query Frame = 3
Query:   24 PHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVW-KDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTP--SDEEMVDLSESK-CDLLMAKPLHARAKPRL 416
            PH ST D  +  Y IP G+ V+++   +GR    W  D  +F PERH+ +  D   Q          L F  GRR C  ++    ++ ++LA L+ GF+W  P  S E+  D++ES    +    PL+A A P L
Sbjct:  361 PHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQ------NFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAVASPYL 489          
The following BLAST results are available for this feature:
BLAST of CX296809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
C71B6_ARATH3.751e-1237.14Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AO_ARATH3.751e-1235.90Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
TCMO_PETCR4.899e-1231.86Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C71BH_ARATH4.899e-1233.33Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH4.899e-1233.08Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR4.899e-1231.58Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C93A3_SOYBN8.357e-1233.94Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C93A1_SOYBN8.357e-1231.78Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71C4_MAIZE8.357e-1234.78Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AP_ARATH8.357e-1233.33Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803A12SK FerrChloL1 Citrus clementina cDNA clone C05803A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296809 ID=CX296809; Name=CX296809; organism=Citrus clementina; type=EST; length=560bp
CCGAATTCGGCACGAGGAACCTGCCTCATCTTTCAACTCGCGATGCCACT
ATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAGCCGAAT
AGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAATTCATAC
CTGAACGTCATATTGGTTCAGTGGACGATCATCATCATCAAGTAGAGTTG
GCGGAAACAGAATTACGATTCCTTTCATTCAGCAGAGGAAGACGCGGTTG
CATGGGCATGGCACTTGGGTCCGAGATGTCTGTAATGCTTTTGGCAAGGC
TTCTTCAAGGTTTTAATTGGAGCACGCCATCGGATGAGGAGATGGTTGAC
CTTTCCGAGTCAAAATGCGACCTCCTAATGGCTAAGCCACTGCATGCTCG
TGCAAAGCCCCGCTTGCCTGCTGATTTATACCCAGCTAATAATTAAATGA
TGTTAACCGTTCTTTATGTTATCTTCATTCTTTAATTTAATGTAATTCTT
CATTATCTCACGATTTATCTATCTTGAACGCTTTGCCATCTCGAAAAGGG
GGGGCCCGGT
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