CX296809

Overview
NameCX296809
Unique NameCX296809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11
Identity = 35/116 (30.17%), Postives = 63/116 (54.31%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSD--EEMVDLSES 362
            +P  +  D  + G+ +PK + VL++   +GR+P+VW++P +F PER +G        +++   +     F  GRR C G+ L  +   ++LA LL  F+W  P+    E +D+ E+
Sbjct:  380 VPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGK------DIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDET 489          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11
Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDL 353
            LP  +  D  I GY IPK + + ++   +GR+PN W++P  F PER I S       VE        L F  GRR C GMA G  +  + L  +L  F+WS P   ++ D+
Sbjct:  371 LPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFIDS------PVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDI 475          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVW-KDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTP--SDEEMVDLSES-KCDLLMAKPLHA 398
            LP L T D  + GY I  G+ VL++   + R+P +W  D  +F PERH+ S  D+H Q      +L+++ F  GRR C G+ L   +  + LA L+  F+WS     + +  DL+E    D+    PL A
Sbjct:  368 LPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQ------DLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPLIA 491          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11
Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = 3
Query:   33 STRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE-SKCDLLMAKPLHARAKPRL 416
            S++   + GY IP  + + ++   +GR+PN W++P +F PER     ++   Q+++      F+ F  GRR C G +L  ++  + LA ++Q F W   +    VD+ E S   L  A P+     PRL
Sbjct:  371 SSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFF---ENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVPVPRL 496          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11
Identity = 43/133 (32.33%), Postives = 66/133 (49.62%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETE-LRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSES-KCDLLMAKPLHARAKPR 413
            LPH  T D  + GY +PK   +      +GR+P  W++P+ F PER +G        V+L  +  ++ + F  GRR C G+ L        +A +++ F W      E VDL+E  +  ++M  PL A A PR
Sbjct:  376 LPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMG----EEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHE-VDLTEKLEFTVVMKHPLKALAVPR 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11
Identity = 42/142 (29.58%), Postives = 67/142 (47.18%), Query Frame = 3
Query:    9 GTRNLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSES-KCDLLMAKPLHARAKPRLPADLY 431
            G  + P     D T+ GY + KG+ ++ +   +  +PNVW DP +F P+R + +    H  +++     + L F  GRR C G++ G +   + LA  L  F    PS E + D++E+       A PL    KP L    Y
Sbjct:  386 GPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTT----HKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPL-DMTEAFGVTNTKATPLEVLVKPCLSPSCY 522          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11
Identity = 43/132 (32.58%), Postives = 64/132 (48.48%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLL-MAKPLHARAKPR 413
            +PH+++ D  I  Y +P+G+ +L++   + R+PN W DP  F PER            E  E   + L+F  GRR C G  L   +  + L  L+Q F W    + E VD+ E   + +  A PL A  K R
Sbjct:  375 VPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPER-----------FEKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVE-VDMKEGVGNTVPKAIPLKAICKAR 494          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11
Identity = 46/130 (35.38%), Postives = 63/130 (48.46%), Query Frame = 3
Query:   30 LSTRDATIA-GYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE-SKCDLLMAKPLHARAKPR 413
            L+T D  +A G  +P G+  +++   +  +  VW DP  F PER I S  +    V++   +LR   F  GRR C G  LG     + +ARL+  F+W  P     V L E  K  L M  PL A A PR
Sbjct:  423 LATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPS--EGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPLAAAATPR 550          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-11
Identity = 44/141 (31.21%), Postives = 71/141 (50.35%), Query Frame = 3
Query:   18 NLPHLSTRD-ATIAGYFIPKGSHVLLSRIGLGRNPNVWKD-PLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSES-KCDLLMAKPLHARAKPRLPADLY 431
            NLP    R    + GY+IPKG+ + ++   +GR+P+VW D P +F PER +      + +++        + F  GRR C G  +G  +   +L  L+  F+W     E+ +++ E+    L  A PL A   PRLP  +Y
Sbjct:  377 NLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYG---RNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAMVIPRLPLHVY 514          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-11
Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 3
Query:   51 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSD--EEMVDLSES 362
            I GY IP  + + ++  G+GR+P+ WKDP +F+PER + S       ++        L F  GRR C  M +G+ M    LA LL  F+W  P     E +D+ ES
Sbjct:  380 INGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNS------NIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEES 479          
The following BLAST results are available for this feature:
BLAST of CX296809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
C76C4_ARATH1.091e-1130.17Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C71BM_ARATH1.091e-1136.04Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH1.091e-1134.62Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN1.862e-1130.23Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C89A2_ARATH1.862e-1132.33Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C82A4_SOYBN1.862e-1129.58Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C81D1_ARATH1.862e-1132.58Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C78AB_ORYSJ1.862e-1135.38Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C75A4_GENTR2.431e-1131.21Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71BY_ARATH2.431e-1135.85Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803A12SK FerrChloL1 Citrus clementina cDNA clone C05803A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296809 ID=CX296809; Name=CX296809; organism=Citrus clementina; type=EST; length=560bp
CCGAATTCGGCACGAGGAACCTGCCTCATCTTTCAACTCGCGATGCCACT
ATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAGCCGAAT
AGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAATTCATAC
CTGAACGTCATATTGGTTCAGTGGACGATCATCATCATCAAGTAGAGTTG
GCGGAAACAGAATTACGATTCCTTTCATTCAGCAGAGGAAGACGCGGTTG
CATGGGCATGGCACTTGGGTCCGAGATGTCTGTAATGCTTTTGGCAAGGC
TTCTTCAAGGTTTTAATTGGAGCACGCCATCGGATGAGGAGATGGTTGAC
CTTTCCGAGTCAAAATGCGACCTCCTAATGGCTAAGCCACTGCATGCTCG
TGCAAAGCCCCGCTTGCCTGCTGATTTATACCCAGCTAATAATTAAATGA
TGTTAACCGTTCTTTATGTTATCTTCATTCTTTAATTTAATGTAATTCTT
CATTATCTCACGATTTATCTATCTTGAACGCTTTGCCATCTCGAAAAGGG
GGGGCCCGGT
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