CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.863e-31
Identity = 68/130 (52.31%), Postives = 92/130 (70.77%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT-----HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            + +  L YLHSAA  PIYHRD+KS+NILLD+K  AKVSDFG SR V + +T     H+ T  QGT GY+DPEY+++ Q T+KSDVYSFGVVL+E++T +K I     +ED +LV Y  + +++ RL E +
Sbjct:  470 QTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECI 599          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.917e-30
Identity = 65/125 (52.00%), Postives = 89/125 (71.20%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            + +  L YLHS++S PIYHRD+KS+NILLD+    KV+DFG SR  + D +H+TT  QGT GY+DPEY+ + Q T+KSDVYSFGVVL E+LT +K I     +ED +LV +  +A+ E RL + +
Sbjct:  464 QTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVI 588          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.773e-27
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 331
            + +  L YLH+  +  I HRD+KS+NILLD   RAKVSDFG SR    D TH+++  +GT GY+DPEY+ S Q TEKSDVYSFGVVL E+L+G+KP+ A +   + ++V
Sbjct:  711 DAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIV 819          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.865e-26
Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM-VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL 367
            V  +  L YLH+ ++  I HRD+KSANILLDD + AKV+DFG S++   +DQTH++T V+G+FGY+DPEY    Q TEKSDVYSFGVV++E++ G+  I      E  +L+ + ++ + + +L
Sbjct:  591 VGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKL 713          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.887e-26
Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM-VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI-------RAINTDEDKSLVGYFLQAINENRLFE 373
            L YLH  A  PI HRD+KS NILLD+   AKV+DFG S+ V   ++ H+TT+V+GT GY+DPEY+ ++Q TEKSDVY FGVV++E+LTG+ PI       + +    DKS   Y LQ + +  + +
Sbjct:  743 LAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQ 868          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.887e-26
Identity = 58/110 (52.73%), Postives = 79/110 (71.82%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ 346
            L YLH+ +S  I HRDIKS NILLD+ Y AKV+DFG SRS   +D+TH++T V+G+FGY+DPEYF+  Q T+KSDVYSFGVVL E+L  +  +  +   E  +L  + ++
Sbjct:  598 LHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIE 707          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.383e-26
Identity = 59/118 (50.00%), Postives = 83/118 (70.34%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            L YLH   S  I HRDIKS+NILLD    A+VSDFG ++ +  +++H+TT V GTFGY+ PEY QS + TEK+DVYSFGV+++E+L+G+ P  A   ++  ++VG+    I+ENR  E
Sbjct:  412 LAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKE 529          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.336e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            L YLH+  S P+ HRD+KSANILLD+ + AKV+DFG S++   +DQTH++T V+G+FGY+DPEYF+  Q T+KSDVYSFGVVL E+L  +  I
Sbjct:  594 LHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVI 686          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.336e-26
Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            V  +  L YLH   +  I HRDIKS+NILLD+ + A +SDFG ++S+   +TH +T V GT GY+DPEY ++S+  EKSD+YSFG+VL+E+LTG+K +     D + +L    L   ++N + EA+
Sbjct:  752 VGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAV-----DNEANLHQLILSKADDNTVMEAV 872          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.089e-25
Identity = 57/115 (49.57%), Postives = 82/115 (71.30%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 364
            L YLH   S  I HRDIKS+NILLD    A+VSDFG ++ +  +++H+TT V GTFGY+ PEY QS + TEK+DVYSFGV+++E+L+G++P  A   ++  ++VG+    I+E R
Sbjct:  414 LSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKR 528          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
WAKLQ_ARATH3.863e-3152.31Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLP_ARATH1.917e-3052.00Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y1677_ARATH5.773e-2753.21Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH2.865e-2647.15Probable receptor-like protein kinase At2g39360 OS... [more]
Y5977_ARATH4.887e-2648.41Probable leucine-rich repeat receptor-like protein... [more]
Y5241_ARATH4.887e-2652.73Probable receptor-like protein kinase At5g24010 OS... [more]
FEI2_ARATH6.383e-2650.00LRR receptor-like serine/threonine-protein kinase ... [more]
HERK_ARATH8.336e-2659.14Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
ERL1_ARATH8.336e-2645.24LRR receptor-like serine/threonine-protein kinase ... [more]
FEI1_ARATH1.089e-2549.57LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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