CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.605e-14
Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 2
Query:   17 ALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ-THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 343
            AL YLH     PI HR+ KSAN+LLDD     VSD G +  +     + L+ ++   +GY  PE F S  +T +SDVYSFGVV++E+LTG+     ++ D D+S    FL
Sbjct:  597 ALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPE-FDSGIYTWQSDVYSFGVVMLELLTGR-----MSYDRDRSRGEQFL 700          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K10_XENLA (Mitogen-activated protein kinase kinase kinase 10 OS=Xenopus laevis GN=map3k10 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.605e-14
Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILL------DDKYRA--KVSDFGTSRSVMVDQTHLTTKVQ--GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 307
            V+++  + YLH+ A +PI HRD+ S+NIL+      DD +     ++DFG +R     +   TTK+   GT+ ++ PE  + S F++ SDV+SFGV+L E+LTG+ P R I+
Sbjct:  221 VQIAKGMTYLHNEAIVPIIHRDLGSSNILILEKAENDDLFNKTLNITDFGLAR-----EWQKTTKMSAAGTYAWMAPEVIRLSLFSKSSDVWSFGVLLWELLTGEVPYREID 327          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.320e-14
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV---DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE--DKSLVGYFLQAINENRLFEAL 379
            V  +  L +LH     P  H+ I S  ILLDD + A+++D+G ++ V     + +       G  GYV PEY  +   + K DVY FG+VL+E++TGQKP+  IN  E    SLV +  Q +   R  +A+
Sbjct:  405 VGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAI 535          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K7_DROME (Mitogen-activated protein kinase kinase kinase 7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.320e-14
Identity = 37/97 (38.14%), Postives = 64/97 (65.98%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYR-AKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 307
            L YLH+    P+ HRD+K  N+LL +K R  K+ DFGT    + D++ + T  +G+  ++ PE F+ S++TEK D++S+ +VL E+L+ ++P + I+
Sbjct:  125 LAYLHAMTPKPLIHRDVKPLNLLLTNKGRNLKICDFGT----VADKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQPFKGID 217          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.560e-14
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            ++++ A+ +LH      I HRDIKS NIL D  + AK++DFG +     D+  +     GT GY+DP Y      + K+DVYS+GVVL+EI++ +K I    +    S+V + +  I E R+ E
Sbjct:  135 LQIASAVHFLHEHG---IIHRDIKSENILFDSNWEAKLADFGLAVDFGGDKK-IRPAPAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAIDV--SRSPASIVDWAVPLIKEGRIGE 252          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE--DKSLVGYFLQAINENRLFEAL 379
            V  +  L +LH        H+ I S  ILLD+ + A+V D+G  + V    +  ++   G FGYV PEY  +   +   DVY FG+VL+EI+TGQKP+   N +E   +SLV +  + ++  R  +A+
Sbjct:  395 VGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAI 522          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13
Identity = 46/133 (34.59%), Postives = 75/133 (56.39%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-------TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            + V+ AL YLHS+   PI H D+K+ NILLD++   +++D G       TS SV +  + +   +Q T GY+ PE+ Q      KSD Y+ GV+L+E+LTG+K   +     ++ LV +    +++ R  E +
Sbjct:  520 IGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIA--IQNT-GYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAFDSSRPRGEQLLVKWASTRLHDRRSLEQM 649          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13
Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            V+  L YLH     PI HRDIK  NIL+D      + DFG +R ++ D T  T  V GT GY+ PE    +    +SDVYS+GVVL+E++T ++ +
Sbjct:  935 VAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLAR-LLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAV 1029          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM-----VDQTHLT-TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            L YLH    I   HRDIK++NILLD KY+ K+SDFG ++        +  + L+ + + GT GY+ PEY    + + K D YSFGV+++EI +G +  +  + +  ++LV    +    N++ E +
Sbjct:  441 LEYLHETCKI--IHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMI 564          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.631e-13
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            +++S  + YLHS   I   HRD+KS N+LL+D+ R KV+DFGT  S +  Q        GT+ ++ PE  +   +T K DVYSFG+VL E+ T   P + +
Sbjct:  194 LDISRGMEYLHSQGVI---HRDLKSNNLLLNDEMRVKVADFGT--SCLETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGM 289          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
SRF3_ARATH5.605e-1442.73Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
M3K10_XENLA5.605e-1439.29Mitogen-activated protein kinase kinase kinase 10 ... [more]
Y1719_ARATH7.320e-1435.88Probable inactive receptor kinase At1g27190 OS=Ara... [more]
M3K7_DROME7.320e-1438.14Mitogen-activated protein kinase kinase kinase 7 O... [more]
STPKL_ARATH9.560e-1437.10Serine/threonine-protein kinase-like protein At5g2... [more]
Y1699_ARATH1.249e-1335.16Probable LRR receptor-like serine/threonine-protei... [more]
SRF2_ARATH1.249e-1334.59Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
PEPR1_ARATH1.249e-1342.71Leucine-rich repeat receptor-like protein kinase P... [more]
CRK43_ARATH1.249e-1334.92Putative cysteine-rich receptor-like protein kinas... [more]
HT1_ARATH1.631e-1340.59Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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