CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.782e-13
Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 2
Query:    5 EVSGALFYLHSAASI-PIYHRDIKSANILLDDKYR-AKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL 367
            +++  + YLH+     PI HRD+ S+NILL+  Y  AK++DFG S+ +    T +T  + G+  ++ PE F++  +TEK DVYSF ++L EI+T + P   +     + L   FL ++ + RL
Sbjct:  286 DIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAM-GSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPYNGM-----EPLRLAFLASVEDYRL 402          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.633e-13
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK-VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            V  +  L YLH      I HRDIK  NILLD      +SDFG ++ +    T + +  VQGT GY+ PE   ++  + +SDVYS+GVVL+E++T +K +
Sbjct:  921 VGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKAL 1019          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PAKH_DICDI (Serine/threonine-protein kinase pakH OS=Dictyostelium discoideum GN=pakH-1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.633e-13
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG 334
            L YLHS     I HRDIKSANILLD+  + K++DFG S+   +  T     + GT  ++ PE    + +  K DV+S G+V +E+  G+ P+  +N      ++G
Sbjct:  151 LVYLHSKQ---IIHRDIKSANILLDETGQVKIADFGVSQ--QIQSTFSKGSIAGTPYWMAPEILNQTDYNNKIDVWSLGIVAIELADGEPPLSEVNPMRAMYMIG 250          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.633e-13
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM--VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++++  + YLH    I I HRD+KS N+L+D+ YR K+SDFG S      +D+    T V GT  +  PE  ++  +TEK+DV+SF +VL EI+T + P + + T
Sbjct:  595 LDIAKGMNYLHCCDPIVI-HRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPV-GTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVTREDPYQGMPT 697          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ROCO6_DICDI (Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum GN=roco6 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.745e-13
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGTSRSVMVD--QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 307
            ++++  + +LHS    P+ HRD+KS N+LL   D  Y AKV DFG S  + +   +  L     G   +V PE  +  ++T KSDVY+FG++L E+LT + P R  N
Sbjct: 1461 LDIAKGMEFLHSVTP-PLLHRDLKSPNVLLSMKDGVYTAKVGDFGLSSRMFIQALKHKLRNFPVGNITWVAPEILREEEYTVKSDVYAFGLILHELLTRKHPYREFN 1566          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 35/100 (35.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            +++  + +LH+     I HRD+KS+N+L+D  +  K++D G +R     QT  T    GT  +  PE  +   + +K+DVYS+ +VL E+LTG++P + I
Sbjct: 1183 DIARGMQHLHTRN---IIHRDLKSSNLLMDKHFNIKIADLGIARETSFTQTMTTI---GTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPYQGI 1276          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-------------RAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            ++++  + YLH     PI HRD+ S NILLD                + K+SDFG SR  M   + +T  V G   Y+ PE F+    +EKSDVYS+G+VL E+LT  +P
Sbjct: 2223 LDIAKGMNYLHGWTP-PILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRLKMEQASQMTQSV-GCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEP 2330          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI 352
            +V   L YLH    I   HRD+K +N+L++ +   K++DFG S +VM +   L     GT+ Y+ PE    +++  KSD++S G+V++E  TG+ P    N +E  + V   ++AI
Sbjct:  174 QVLQGLIYLHHDRHI--IHRDLKPSNLLINHRGEVKITDFGVS-TVMTNTAGLANTFVGTYNYMSPERIVGNKYGNKSDIWSLGLVVLECATGKFPYAPPNQEETWTSVFELMEAI 286          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT----HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            V+++ A+ +LH+     I HRD+KS NILLD+  R ++ DFG +R  M +QT    H+T  + GT G+V PE      +    DV+S+GVVL E++TG+KP
Sbjct:  122 VDLAKAMVFLHAKK---IIHRDLKSKNILLDEFQRIRLCDFGFAR--MSEQTKKSRHMT--MCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRKP 215          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   26 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQ-GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            YLHS   I I HRD+K+ N+L+DD ++ KV+DFG +      ++H   K   GT G+V PE      +TEK+DVYS+ +VL E+LT   P    NT
Sbjct:  962 YLHSRNPI-IIHRDLKTDNLLVDDSWQVKVADFGLATV----KSHTFAKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNT 1052          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
YTYK2_DICDI2.782e-1335.77Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
RPK1_IPONI3.633e-1341.41Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
PAKH_DICDI3.633e-1337.14Serine/threonine-protein kinase pakH OS=Dictyostel... [more]
DRKC_DICDI3.633e-1340.00Probable serine/threonine-protein kinase drkC OS=D... [more]
ROCO6_DICDI4.745e-1338.32Probable serine/threonine-protein kinase roco6 OS=... [more]
Y9963_DICDI6.197e-1335.00Probable serine/threonine-protein kinase DDB_G0272... [more]
PYK1_DICDI6.197e-1339.09Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
M2K2_ARATH6.197e-1334.48Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
GEFX_DICDI6.197e-1342.57RasGEF domain-containing serine/threonine-protein ... [more]
DRKD_DICDI6.197e-1343.75Probable serine/threonine-protein kinase drkD OS=D... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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