CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.803e-12
Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            ++  L YLH+   +PI H +I+S N+L+DD + A++++FG  + ++            + GY  PE  +  +   +SDVY+FG++L+EIL G+KP
Sbjct:  481 IARGLAYLHTGQEVPIIHGNIRSKNVLVDDFFFARLTEFGLDKIMVQAVADEIVSQAKSDGYKAPELHKMKKCNPRSDVYAFGILLLEILMGKKP 575          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.355e-12
Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++++  + YLH +  I   HRDIKS N+LLD+    K+ DFG S+  +  ++   TK  G+  ++ PE      +TEK DVY+FG++L E+ TG+ P   +++
Sbjct:  766 IQIAQGMNYLHLSGVI---HRDIKSLNLLLDEHMNVKICDFGLSK--LKSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLDS 863          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.355e-12
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 358
            +E +  + ++HSA+   + H +IKS N+LL  +    VSDFG +  +    +H T     + GY  PE  ++ + T+KSDVYSFGV+L+E+LTG+   +    +E   L  +    + E
Sbjct:  447 LEAARGISHIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFGIAPLM----SHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVRE 561          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K7L_DROME (Putative mitogen-activated protein kinase kinase kinase 7-like OS=Drosophila melanogaster GN=Takl1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.355e-12
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR-AKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            ++ + AL YLHS    PI HRDIK  N+LL +++   K+ DFG +     D ++  T +QGT  Y+ PE  +  ++T K DVYSFG++L E++T Q P
Sbjct:  113 LQCAKALAYLHSLDR-PIVHRDIKPQNMLLYNQHEDLKICDFGLA----TDMSNNKTDMQGTLRYMAPEAIKHLKYTAKCDVYSFGIMLWELMTRQLP 205          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.075e-12
Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++G + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  253 IAGGMNYLHLHK---IIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 348          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.075e-12
Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++G + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  253 IAGGMNYLHLHK---IIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 348          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.075e-12
Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++G + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  220 IAGGMNYLHLHK---IIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 315          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M2K1_ARATH (Mitogen-activated protein kinase kinase 1 OS=Arabidopsis thaliana GN=MKK1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.075e-12
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN 361
            L Y+H    I   HRD+K +N+L++ +   K++DFG S+ ++   + L     GT+ Y+ PE    S ++ KSD++S G+VL+E  TG+ P       +  S V   + AI EN
Sbjct:  177 LCYIHHERRI--IHRDLKPSNLLINHRGEVKITDFGVSK-ILTSTSSLANSFVGTYPYMSPERISGSLYSNKSDIWSLGLVLLECATGKFPYTPPEHKKGWSSVYELVDAIVEN 287          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIP-IYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN 361
            E+  AL +LHS  +IP I H ++K + ILLD     K++D+G S+ + +D    +        +VDP YF S + T +SD+Y+FG++L+++LT ++P+  I  D   +L    + A+ +N
Sbjct:  562 EICSALLFLHS--NIPCIIHGNLKPSKILLDSNLVTKINDYGISQLIPIDGLDKSDP------HVDPHYFVSREMTLESDIYAFGIILLQLLT-RRPVSGILRDVKCALENDNISAVLDN 672          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            +V+  + YLH  A + + HRD+KS N+++      K+ DFG SR      TH++  + GTF ++ PE  QS   +E  D YS+GVVL E+LT + P + +
Sbjct:  113 DVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASR-FHNHTTHMS--LVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGL 209          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
TMKL1_ARATH1.803e-1234.74Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
Y9955_DICDI2.355e-1235.92Probable serine/threonine-protein kinase DDB_G0267... [more]
Y3868_ARATH2.355e-1233.61Probable inactive receptor kinase At3g08680 OS=Ara... [more]
M3K7L_DROME2.355e-1241.84Putative mitogen-activated protein kinase kinase k... [more]
M3K12_RAT3.075e-1237.62Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_MOUSE3.075e-1237.62Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN3.075e-1237.62Mitogen-activated protein kinase kinase kinase 12 ... [more]
M2K1_ARATH3.075e-1234.21Mitogen-activated protein kinase kinase 1 OS=Arabi... [more]
PUB32_ARATH4.017e-1234.17U-box domain-containing protein 32 OS=Arabidopsis ... [more]
MLTK_MOUSE4.017e-1238.00Mitogen-activated protein kinase kinase kinase MLT... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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