CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            +V+  + YLH  A + + HRD+KS N+++      K+ DFG SR      TH++  + GTF ++ PE  QS   +E  D YS+GVVL E+LT + P + +
Sbjct:  113 DVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASR-FHNHTTHMS--LVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGL 209          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K13_PONAB (Mitogen-activated protein kinase kinase kinase 13 OS=Pongo abelii GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++  + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  263 IASGMNYLHLHK---IIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMS--FAGTVAWLAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 358          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K13_MOUSE (Mitogen-activated protein kinase kinase kinase 13 OS=Mus musculus GN=Map3k13 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++  + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  262 IASGMNYLHLHK---IIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 357          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++  + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  263 IASGMNYLHLHK---IIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 358          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K13_BOVIN (Mitogen-activated protein kinase kinase kinase 13 OS=Bos taurus GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++  + YLH      I HRD+KS N+L+      K+SDFGTS+ +    T ++    GT  ++ PE  ++   +EK D++SFGVVL E+LTG+ P + +++
Sbjct:  263 IASGMNYLHLHK---IIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDS 358          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: FUSED_DROME (Serine/threonine-protein kinase fused OS=Drosophila melanogaster GN=fu PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.017e-12
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 2
Query:   17 ALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRA 301
            AL+YLHS     I HRD+K  N+LLD    AK+ DFG +R++ +  TH+ T ++GT  Y+ PE      +   +D++S G +  E + GQ P  A
Sbjct:  112 ALYYLHSNR---ILHRDLKPQNVLLDKNMHAKLCDFGLARNMTLG-THVLTSIKGTPLYMAPELLAEQPYDHHADMWSLGCIAYESMAGQPPFCA 202          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL 328
            L YLHS  +    H +IKS+NILL   + AKVSDFG ++ V    T+         GY  PE     + ++K DVYSFGVVL+E++TG+ P  ++  +E   L
Sbjct:  482 LDYLHSQGT-STSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRAT----GYRAPEVTDPKRVSQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDL 579          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PHG2_DICDI (Serine/threonine-protein kinase phg2 OS=Dictyostelium discoideum GN=phg2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEIL 277
            EV   + YLHS  + P+ HRD+K+ NIL+   + AK+ DFG +R++ +        ++GT  Y  PE +    F  KSDVYS GV++ E +
Sbjct:  911 EVVEGVRYLHSM-NPPMVHRDLKTLNILISSDWTAKLCDFGLTRTMTMTNVSTLGMLRGTMAYTAPEIYDGLLFNTKSDVYSLGVIMWEAI 1000          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K7_RAT (Mitogen-activated protein kinase kinase kinase 7 OS=Rattus norvegicus GN=Map3k7 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA-KVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            ++ S  + YLHS     + HRD+K  N+LL       K+ DFGT+  +   QTH+T   +G+  ++ PE F+ S ++EK DV+S+G++L E++T +KP   I
Sbjct:  135 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 232          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: M3K7_PONAB (Mitogen-activated protein kinase kinase kinase 7 OS=Pongo abelii GN=MAP3K7 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA-KVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            ++ S  + YLHS     + HRD+K  N+LL       K+ DFGT+  +   QTH+T   +G+  ++ PE F+ S ++EK DV+S+G++L E++T +KP   I
Sbjct:  135 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 232          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
MLTK_HUMAN4.017e-1238.00Mitogen-activated protein kinase kinase kinase MLT... [more]
M3K13_PONAB4.017e-1236.63Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_MOUSE4.017e-1236.63Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_HUMAN4.017e-1236.63Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_BOVIN4.017e-1236.63Mitogen-activated protein kinase kinase kinase 13 ... [more]
FUSED_DROME4.017e-1238.95Serine/threonine-protein kinase fused OS=Drosophil... [more]
Y1848_ARATH6.851e-1240.78Probable inactive receptor kinase At1g48480 OS=Ara... [more]
PHG2_DICDI6.851e-1238.46Serine/threonine-protein kinase phg2 OS=Dictyostel... [more]
M3K7_RAT6.851e-1237.25Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_PONAB6.851e-1237.25Mitogen-activated protein kinase kinase kinase 7 O... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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