CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.526e-11
Identity = 33/95 (34.74%), Postives = 57/95 (60.00%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            +S  L +LHS  ++   H ++ ++NILLD++  A ++D+G SR +            GT GY  PE+ +    + K+DVYS G++++E+LTG+ P
Sbjct:  644 ISRGLAHLHSNENM--IHENLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSP 736          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y9844_DICDI (Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum GN=DDB_G0282963 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 2
Query:   53 IYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT 280
            + HRDIKS N+L++ ++  KV+DFG ++   + QT   + ++GT  Y  PE +    ++EK+DVYS G+VL EI T
Sbjct: 1593 LVHRDIKSQNLLINSQFDLKVADFGLAKPTEL-QTGSNSTIKGTMAYCAPELYNGISYSEKADVYSLGIVLWEITT 1667          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 37/111 (33.33%), Postives = 65/111 (58.56%), Query Frame = 2
Query:   26 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 358
            +LH+A      H +IKS+N+++  +  A +SDFG +  + V        ++G  GY  PE  ++ + T KSDVYSFGV+++E+LTG+ P+++ + D+   L  +    + E
Sbjct:  472 HLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVP----IAPMRGA-GYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVVRE 577          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS------RSVMVDQTHLTTK---------VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            + ++ AL YLH+     I HRD+K AN+LLD+K+   ++DFG +      R V +     + K         + GT  Y+ PE  +   +TEK+D+YSFG+++ E+LTG  P
Sbjct:  131 LHLAKALQYLHNNG---IVHRDVKPANVLLDEKFFPYLADFGLAEYKKNLREVNLQNWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDMYTEKADIYSFGILINELLTGVVP 239          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: KS6A2_HUMAN (Ribosomal protein S6 kinase alpha-2 OS=Homo sapiens GN=RPS6KA2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 331
            E++ AL +LHS   + I +RD+K  NILLD++   K++DFG S+   +D         GT  Y+ PE       T+ +D +SFGV++ E+LTG  P +  +  E  +L+
Sbjct:  167 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKITDFGLSKEA-IDHDKRAYSFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMALI 271          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: KOK0_YEAST (Probable serine/threonine-protein kinase YOL100W OS=Saccharomyces cerevisiae GN=YOL100W PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR-------SVMVDQTHLTTKVQ---GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 307
            ++  A+ YLHS     I HRDIK  NILLD + + K++DFGT++       SV   +  L+T+ +   GT  YV PE    S    + D+++FG +L +++ G+ P +A N
Sbjct:  286 QIIDAIDYLHSNG---IIHRDIKPENILLDGEMKIKLTDFGTAKLLNPTNNSVSKPEYDLSTRSKSFVGTAEYVSPELLNDSFTDYRCDIWAFGCILFQMIAGKPPFKATN 393          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: IRAK3_HUMAN (Interleukin-1 receptor-associated kinase 3 OS=Homo sapiens GN=IRAK3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS--RSVMVDQT---HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTG 283
            + +S A+ YLH+     +    I SANILLDD+++ K++DF  +  RS +  Q+   ++T+       Y+  EY +  + + K+DVYSFG+V++E+LTG
Sbjct:  272 IGISKAIHYLHNVQPCSVICGSISSANILLDDQFQPKLTDFAMAHFRSHLEHQSCTINMTSSSSKHLWYMPEEYIRQGKLSIKTDVYSFGIVIMEVLTG 370          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y9865_DICDI (Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum GN=DDB_G0280461 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.603e-11
Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 289
            +++  + YLHS     I HRD+KS N+LL   +  K+ DFG ++ + + Q  L+  + GT  ++ PE     Q++  +D+YSFG+VL+E++T  K
Sbjct:  122 DIAEGMEYLHSKQ---IMHRDLKSNNLLLGRNWTIKICDFGFAKEITI-QNPLSMTICGTDEFMSPEVILGIQYSYSADIYSFGMVLLELITRSK 212          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y9848_DICDI (Probable serine/threonine-protein kinase DDB_G0272092 OS=Dictyostelium discoideum GN=DDB_G0272092 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.603e-11
Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 2
Query:   53 IYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEI 274
            + HRD+KS N+L+ + +  K+ DFG SR           K++GT+ YV PE +   ++T KSDVYS G++L E+
Sbjct:  718 VLHRDLKSLNLLVTENWTVKICDFGLSRFDTGSNLETLGKLRGTYAYVAPEVYFGKKYTTKSDVYSMGIILWEM 791          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: YP150_YEAST (Putative serine/threonine-protein kinase YPL150W OS=Saccharomyces cerevisiae GN=YPL150W PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.400e-11
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTE-KSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 376
            ++SGA++Y HS   +   HRD+K  NILLD    AK++DFG +R  M   T  T  V GT  Y+ PE  +   +   K D++S GV+L  ++TG  P      D+D++   +  + +NE   ++A
Sbjct:  140 QISGAVYYAHSMHCV---HRDLKLENILLDKNGNAKLTDFGFTRECMTKTTLET--VCGTTVYMAPELIERRTYDGFKIDIWSLGVILYTLITGYLPF----DDDDEAKTKW--KIVNEEPKYDA 253          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
IMK2_ARATH1.526e-1134.74Probably inactive leucine-rich repeat receptor-lik... [more]
Y9844_DICDI1.993e-1142.11Probable serine/threonine-protein kinase DDB_G0282... [more]
Y5830_ARATH1.993e-1133.33Probable inactive receptor kinase At5g58300 OS=Ara... [more]
P2C31_ARATH1.993e-1135.71Protein kinase and PP2C-like domain-containing pro... [more]
KS6A2_HUMAN1.993e-1135.78Ribosomal protein S6 kinase alpha-2 OS=Homo sapien... [more]
KOK0_YEAST1.993e-1136.04Probable serine/threonine-protein kinase YOL100W O... [more]
IRAK3_HUMAN1.993e-1136.36Interleukin-1 receptor-associated kinase 3 OS=Homo... [more]
Y9865_DICDI2.603e-1135.79Probable serine/threonine-protein kinase DDB_G0280... [more]
Y9848_DICDI2.603e-1140.54Probable serine/threonine-protein kinase DDB_G0272... [more]
YP150_YEAST3.400e-1135.20Putative serine/threonine-protein kinase YPL150W O... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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