CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.422e-25
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ 346
            L YLH+  + P+ HRD+KSANILLD+   AKV+DFG S++   +DQTH++T V+G+FGY+DPEYF+  Q TEKSDVYSFGVV+ E+L  +  I    T E  +L  + ++
Sbjct:  591 LHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMK 700          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.857e-25
Identity = 58/128 (45.31%), Postives = 85/128 (66.41%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR---SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            + + A+ +LHS+ + PIYHRDIKS+NILLD ++ +K+SDFG SR   S   + +H++T  QGT GY+DP+Y Q  Q ++KSDVYSFGVVLVEI++G K I       + +L    +  I   R+ + +
Sbjct:  417 QTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDII 544          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.426e-25
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            + + A+ YLHS+ + PIYHRDIKS NILLD  + +KV+DFG SR  M + +H++T  QGT GY+DP+Y Q    ++KSDVYSFGVVL EI+TG K +
Sbjct:  452 QTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVV 548          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.137e-25
Identity = 56/111 (50.45%), Postives = 78/111 (70.27%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 331
            V+ +  L YLH+ +   I HRD+KS+NILLD    AKVSDFG S+     D +H+TT V+GT GY+DPEY+ + Q TEKSDVYSFGVVL+E++ G++P+    + +  +LV
Sbjct:  711 VDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLV 821          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.403e-25
Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            V  +  L YLH   +  I HRDIKS+NILLD  + A++SDFG ++S+   +T+ +T V GT GY+DPEY ++S+  EKSD+YSFG+VL+E+LTG+K +     D + +L    L   ++N + EA+
Sbjct:  755 VGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAV-----DNEANLHQMILSKADDNTVMEAV 875          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.057e-25
Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV-DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTD 313
            V+ +  L YLH      I HRD+KS+NILLDD+ +AK++DFG SRS  + D++H++T V GTFGY+D EY+Q+++ +EKSDVYSFGVVL+EI+T  KP+   N D
Sbjct:  671 VDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIIT-NKPVIDHNRD 774          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.057e-25
Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            +E +  L YLHS  + PI HRDIK+ NILLD++ +AK++DFG SRS  +  +TH++T V GT GY+DPEY+Q+++  EKSDVYSFG+VL+EI+T Q  I
Sbjct:  683 LEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVI 781          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.217e-25
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGY 337
            L YLH+ A+  I HRD+K+ NILLD+   AKVSDFG S+   +D+ H++T V+G+FGY+DPEYF+  Q T+KSDVYSFGVVL E+L  +  I      E  +L  Y
Sbjct:  640 LHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEY 745          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.217e-25
Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 2
Query:   17 ALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            AL YLH A    + HRDIK++NIL+DD++ AK+SDFG ++ +   ++H+TT+V GTFGYV PEY  +    EKSD+YSFGV+L+E +TG+ P+       + +LV +    +   R  E +
Sbjct:  293 ALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVV 413          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.217e-25
Identity = 54/87 (62.07%), Postives = 70/87 (80.46%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEIL 277
            L YLH+ AS  I HRD+K+ NILLD+   AKV+DFG S++   +DQTH++T V+G+FGY+DPEYF+  Q TEKSDVYSFGVVL+E+L
Sbjct:  619 LHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVL 705          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
Y5597_ARATH1.422e-2551.82Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLR_ARATH1.857e-2545.31Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLO_ARATH2.426e-2555.67Wall-associated receptor kinase-like 14 OS=Arabido... [more]
Y5487_ARATH4.137e-2550.45Probable LRR receptor-like serine/threonine-protei... [more]
ERL2_ARATH5.403e-2544.44LRR receptor-like serine/threonine-protein kinase ... [more]
Y1756_ARATH7.057e-2554.29Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH7.057e-2555.56Probable LRR receptor-like serine/threonine-protei... [more]
Y5613_ARATH9.217e-2551.89Probable receptor-like protein kinase At5g61350 OS... [more]
Y2296_ARATH9.217e-2543.80Probable receptor-like protein kinase At2g42960 OS... [more]
THE1_ARATH9.217e-2562.07Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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