CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ANKK1_MOUSE (Ankyrin repeat and protein kinase domain-containing protein 1 OS=Mus musculus GN=Ankk1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR---SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFT--EKSDVYSFGVVLVEILTGQKPIRAIN 307
            E S A+ +LHS    P+ H D+K  NILLD+    K+SDFG S+        Q    + ++GT  Y+ PE F  +      + DVYSF +V+ EILT +KP   +N
Sbjct:  138 ETSLAMNFLHSIKP-PLLHLDLKPGNILLDNNMHVKISDFGLSKWMEQSTQKQYIERSALRGTLSYIPPEMFLENNKAPGPEYDVYSFAIVIWEILTQKKPYAGLN 242          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 2
Query:   17 ALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            A+ YLHS  +    H +IKS+NILL + + AKVSD+    + M+  T    ++ G   Y  PE   + + ++K+DVYSFGV+++E+LTG+ P
Sbjct:  453 AISYLHSRDATTS-HGNIKSSNILLSESFEAKVSDY--CLAPMISPTSTPNRIDG---YRAPEVTDARKISQKADVYSFGVLILELLTGKSP 538          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK--VQGTFGYVDPEYF--QSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 364
            E +  + +LH   S P+ H D+K ANILLD  Y  K+SDFG ++   +  +H  +   + GT  Y+ PE    +S  F  K DVYSF +V+  +LT +KP       ++K+++   ++ +  +R
Sbjct:  124 ETAVGMNFLH-CMSPPLLHLDLKPANILLDAHYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPFA-----DEKNILHIMMKVVKGHR 241          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RIPK4_HUMAN (Receptor-interacting serine/threonine-protein kinase 4 OS=Homo sapiens GN=RIPK4 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK--VQGTFGYVDPEYF--QSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 364
            E +  + +LH  A  P+ H D+K ANILLD  Y  K+SDFG ++   +  +H  +   + GT  Y+ PE    +S  F  K DVYSF +V+  +LT +KP       ++K+++   ++ +  +R
Sbjct:  124 ETAVGMNFLHCMAP-PLLHLDLKPANILLDAHYHVKISDFGLAKCNGLSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPFA-----DEKNILHIMVKVVKGHR 241          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PKNB_MYCLE (Serine/threonine-protein kinase pknB OS=Mycobacterium leprae GN=pknB PE=3 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   53 IYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT--TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            I HRD+K ANI++      KV DFG +R++  D T +T    V GT  Y+ PE  +      +SDVYS G VL EILTG+ P
Sbjct:  134 IIHRDVKPANIMISATNAVKVMDFGIARAI-ADSTSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEILTGEPP 214          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PKNB_LACLA (Probable serine/threonine-protein kinase pknB OS=Lactococcus lactis subsp. lactis GN=pknB PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            E+  A+   HS     I HRD+K  N+L+      KV+DFG ++++       T  + G+  Y+ PE  + S  T +SD+Y+ G++L E+LTGQ P
Sbjct:  119 EILSAMDMAHSHG---IIHRDLKPQNVLVSSSGTVKVTDFGIAKALSETSLTQTNTMFGSVHYLSPEQARGSNATVQSDIYAIGIILFELLTGQIP 211          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PK1_STRTO (Serine/threonine-protein kinase PK-1 OS=Streptomyces toyocaensis GN=spk1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            V  AL   H A  +   HRD+K  N+L+ D  R KV+DFG  R+V    T+ T  V GT  Y+ PE  +      + DVY+ G++L E+LTG+KP
Sbjct:  125 VLAALGAAHRAGFV---HRDMKPENVLIGDDGRVKVADFGLVRAVD-SVTNTTGTVLGTVSYLAPEQIEHGTADPRVDVYACGILLYEMLTGEKP 215          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ANKK1_HUMAN (Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL----TTKVQGTFGYVDPEYFQSSQFT--EKSDVYSFGVVLVEILTGQKPIRAIN 307
            E S A+ +LHS    P+ H D+K  NILLD     K+SDFG S+  M   T +     + ++G   Y+ PE F  S      K DVYSF +V+ E+LT +KP    N
Sbjct:  126 ETSLAMNFLHSIKP-PLLHLDLKPGNILLDSNMHVKISDFGLSK-WMEQSTRMQYIERSALRGMLSYIPPEMFLESNKAPGPKYDVYSFAIVIWELLTQKKPYSGFN 230          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFG--YVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL 328
            V+ AL Y+       + HR++KSANI LD  +  K+SDF      +V +T   + V       Y  PE   S + TE  DVYSFGVVL+E++TGQ   +A      +SL
Sbjct:  693 VAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDH--IVGETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQSAEKAEEGSSGESL 799          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: STE7_YEAST (Serine/threonine-protein kinase STE7 OS=Saccharomyces cerevisiae GN=STE7 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 34/109 (31.19%), Postives = 61/109 (55.96%), Query Frame = 2
Query:   32 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 358
            H      I HRDIK +N+L++ K + K+ DFG S+ ++     +     GT  Y+ PE  Q + ++ K DV+S G++++E++TG+ P+   N D    ++    + +NE
Sbjct:  320 HLYRQYKIIHRDIKPSNVLINSKGQIKLCDFGVSKKLI---NSIADTFVGTSTYMSPERIQGNVYSIKGDVWSLGLMIIELVTGEFPLGGHN-DTPDGILDLLQRIVNE 424          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
ANKK1_MOUSE4.441e-1138.68Ankyrin repeat and protein kinase domain-containin... [more]
Y5659_ARATH5.800e-1140.22Probable inactive receptor kinase At5g16590 OS=Ara... [more]
RIPK4_MOUSE5.800e-1133.06Receptor-interacting serine/threonine-protein kina... [more]
RIPK4_HUMAN5.800e-1133.06Receptor-interacting serine/threonine-protein kina... [more]
PKNB_MYCLE5.800e-1145.12Serine/threonine-protein kinase pknB OS=Mycobacter... [more]
PKNB_LACLA5.800e-1135.42Probable serine/threonine-protein kinase pknB OS=L... [more]
PK1_STRTO5.800e-1141.05Serine/threonine-protein kinase PK-1 OS=Streptomyc... [more]
ANKK1_HUMAN5.800e-1139.25Ankyrin repeat and protein kinase domain-containin... [more]
Y5694_ARATH7.575e-1138.53Probably inactive leucine-rich repeat receptor-lik... [more]
STE7_YEAST7.575e-1131.19Serine/threonine-protein kinase STE7 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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