CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PKN5_MYXXA (Serine/threonine-protein kinase pkn5 OS=Myxococcus xanthus GN=pkn5 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 34/102 (33.33%), Postives = 60/102 (58.82%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT--KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRA 301
            +++  AL Y+H    +   HRD+K +NI++DD  + ++ DFG ++  + D   +T   K+ GT+ Y+ PE         ++D+YS GV+L E+L+G+ P  A
Sbjct:  226 LQICEALAYIHGHGLV---HRDLKPSNIMVDDDRQVRLMDFGLAK-FLADDAAITEAGKLVGTYRYMAPEQILGEPLDGRADLYSLGVILYELLSGRPPFDA 323          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: KPC1_CAEEL (Protein kinase C-like 1 OS=Caenorhabditis elegans GN=tpa-1 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE 316
            E+  AL +LH+     I +RD+K  N+LLD     K++DFG +++ M  +  + +   GT  Y+ PE  +   + E  D +SFGV++ E+L GQ P      DE
Sbjct:  482 EIVVALQFLHTNN---IIYRDLKLDNVLLDCDGHIKLADFGMAKTEMNRENGMASTFCGTPDYISPEIIKGQLYNEAVDFWSFGVLMYEMLVGQSPFHGEGEDE 582          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: FUZ7_USTMA (Dual specificity protein kinase FUZ7 OS=Ustilago maydis GN=FUZ7 PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDED 319
            V VS  L YL+    I   HRD+K +NIL++   + K+ DFG S  ++     +     GT  Y+ PE  Q  Q++ KSDV+S GV ++E+  G+ P      D+D
Sbjct:  212 VAVSHGLTYLYDVHRI--IHRDVKPSNILVNGAGQIKICDFGVSGELI---NSIADTFVGTSTYMSPERIQGDQYSVKSDVWSLGVSIIELALGRFPFAENEEDDD 312          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT-TKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYF 340
            ++  L YLH      I H DIK  NILLD     KVSDFG ++     ++ L+    +GT GY+ PE F     + + KSDVYSFG+++++++ G +    + T +  +   YF
Sbjct:  602 IARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMI-GARSKEIVETVDSAASSTYF 714          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 34/107 (31.78%), Postives = 66/107 (61.68%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR----SVMVDQTHLTTKVQGTFGYVDPEYF---QSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 304
            E++  + YLH+  + P+ H D+K+ NILLD+++  K++DFG S+    S+   +++ +    GT  Y+ PE +   Q S+ + K D+YS+ V++ E+L+ ++P   +
Sbjct:  127 EIALGVNYLHNM-NPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSYKSAPEGGTIIYMPPENYEPGQKSRASVKHDIYSYAVIMWEVLSRKQPFEEV 232          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: MST4_HUMAN (Serine/threonine-protein kinase MST4 OS=Homo sapiens GN=MST4 PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP---------IRAINTDEDKSLVGYFLQAINE 358
            E+   L YLHS   I   HRDIK+AN+LL ++   K++DFG +  +   Q    T V GT  ++ PE  Q S +  K+D++S G+  +E+  G+ P         +  I  +   +LVG F ++  E
Sbjct:  127 EILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKE 249          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: MEK2_CAEEL (Dual specificity mitogen-activated protein kinase kinase mek-2 OS=Caenorhabditis elegans GN=mek-2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            V V   L YL     I I HRD+K +N+L++     K+ DFG S  +++D   +     GT  Y+ PE    S +T  SD++SFG+ LVE+L G+ P+ A +  E  ++   F  A NE  L ++L
Sbjct:  176 VAVVRGLTYLKD--EIKILHRDVKPSNMLVNSNGEIKLCDFGVS-GMLIDS--MANSFVGTRSYMAPERLTGSHYTISSDIWSFGLSLVELLIGRYPVPAPSQAEYATM---FNVAENEIELADSL 293          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: DLK1_CAEEL (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis elegans GN=dlk-1 PE=1 SV=4)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR-SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 292
            E++  + YLH    I   HRD+KS NIL+  +   K+ DFGTS     +D T ++    GT  ++ PE  +     EK DVYSFGVVL E+LT + P
Sbjct:  229 EIADGMHYLHQNKVI---HRDLKSPNILISAEDSIKICDFGTSHMQKKMDSTMMS--FCGTVSWMAPEMIKKQPCNEKVDVYSFGVVLWEMLTRETP 320          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
PKN5_MYXXA7.575e-1133.33Serine/threonine-protein kinase pkn5 OS=Myxococcus... [more]
KPC1_CAEEL7.575e-1134.62Protein kinase C-like 1 OS=Caenorhabditis elegans ... [more]
FUZ7_USTMA7.575e-1135.85Dual specificity protein kinase FUZ7 OS=Ustilago m... [more]
Y5393_ARATH9.893e-1135.09Probable receptor-like protein kinase At5g39030 OS... [more]
RIPK2_MOUSE9.893e-1131.78Receptor-interacting serine/threonine-protein kina... [more]
MST4_HUMAN9.893e-1133.07Serine/threonine-protein kinase MST4 OS=Homo sapie... [more]
MEK2_CAEEL9.893e-1135.71Dual specificity mitogen-activated protein kinase ... [more]
DLK1_CAEEL9.893e-1141.24Mitogen-activated protein kinase kinase kinase dlk... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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